| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1981 |
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| Symbol | murD |
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| ID | 5136053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2125461 |
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| End bp | 2126783 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640533438 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_001217905 |
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| Protein GI | 147674702 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCGTT GGCAAGGCAT ACAACATGTG GTCGTCGTGG GGCTCGGGAT TACCGGGCTC
TCTGTCGTTA ATTATCTGCG AAAATATCAT CCGTCGGTAA CCGTGCAGGT TATCGATACG
CGCGAAATAC CACCGGGGCA AGAGCAGCTT TCGTCGGACG TTGCACTGCA CCGTGGCGGG
TGGAATCTTG AGTGGTTACT CAATGCCGAT TTGGTAGTCA CCAATCCAGG CATTGCGTTG
GCGACGCCGG AAATCCAACA AGTGCTGGCC GCTGGAATTC CTGTTGTCGG TGATATTGAG
CTCTTTGCAT GGCATGTGGA TACACCCGTT ATTGCGATCA CTGGCTCGAA CGGCAAAAGC
ACCGTCACTG ATTTAAGTGG TGTGTTAGCC AATGCTGCTG GTGTGAAGGC CGCGGTAGGC
GGCAATATTG GGGTTCCGGC ACTGGATCTG ATTTCTCCAG ACGTTGAACT GTATGTGCTT
GAGCTATCAA GCTTCCAATT AGAAACCACC TCTAGTCTAA AACTGAAAGC GGCTGCGTTT
CTCAATCTTT CTGAAGATCA TATGGATCGT TATCAGGGGA TGGGAGATTA CCGCCAAGCC
AAACTGCGCA TTTTCGATCA TGCCGAAACC GCAGTGGTGA ATGCCGATGA TACTCAAACT
TTTCCTGACC ACGCGGCGCA TCTGCAAGTG GTGACGTTTG GTGTCGAGCA AGCTGCACAA
TTTAGCCTTG CTCAACATCA AGGCCGCGAA TACCTTTTTG CGCGCGATGA GGCCGTCATG
GCGTGTGCTG AGCTGAGTTT AGTTGGCCGT CATAACGTGA CAAACGTACT TACCGTGTTA
GCTTTGCTGG ATTCAGCCGG AGTAAACTTC CGTTTGGCTT TGGATGCACT CAAGTCTTAC
ACGGGTTTGA CACACCGCTG CCAAGTGGTT GCCGATAATC ACGGCATCAA GTGGGTCAAT
GATTCTAAGG CGACCAATGT TGCGAGTACG CTGGCAGCAT TGTCGGGATT AAAAATCGAA
GGCCAGCTCT ATTTGTTGGT TGGTGGCGTA GGTAAAGGGG CGGATTTCAC GCCGCTCGCC
CCCGTATTGG CGACATTGCC TGTGCAATTG TGCTGCTTTG GTGTGGACGG CCATCAATTT
ATGCCACTGC ACCCTTCGGC TCGGTTTTAT GACTCGATGG AGAGCATAAT TCGCTCAATT
CGCCCGCAAT TAAAAAGTGG GGATATGGTG CTGCTCTCTC CCGCTTGTGC GAGCTTTGAT
CAGTTCAAAA ACTTTATGGC GCGTGGGGAT ATTTTTGCCC AACTCGCTCG GCAATATGCA
TAA
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| Protein sequence | MDRWQGIQHV VVVGLGITGL SVVNYLRKYH PSVTVQVIDT REIPPGQEQL SSDVALHRGG
WNLEWLLNAD LVVTNPGIAL ATPEIQQVLA AGIPVVGDIE LFAWHVDTPV IAITGSNGKS
TVTDLSGVLA NAAGVKAAVG GNIGVPALDL ISPDVELYVL ELSSFQLETT SSLKLKAAAF
LNLSEDHMDR YQGMGDYRQA KLRIFDHAET AVVNADDTQT FPDHAAHLQV VTFGVEQAAQ
FSLAQHQGRE YLFARDEAVM ACAELSLVGR HNVTNVLTVL ALLDSAGVNF RLALDALKSY
TGLTHRCQVV ADNHGIKWVN DSKATNVAST LAALSGLKIE GQLYLLVGGV GKGADFTPLA
PVLATLPVQL CCFGVDGHQF MPLHPSARFY DSMESIIRSI RPQLKSGDMV LLSPACASFD
QFKNFMARGD IFAQLARQYA
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