Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1978 |
Symbol | murC |
ID | 5135067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 2121726 |
End bp | 2123186 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640533435 |
Product | UDP-N-acetylmuramate--L-alanine ligase |
Protein accession | YP_001217902 |
Protein GI | 147675354 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0586657 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGATTA AACATACCCA AGACCTCGCC CAAATTCGCG CTATGGTGCC AGAGATGCGC CGTGTAAAAG CGATCCACTT TATTGGCATT GGCGGGGCGG GGATGAGCGG GATTGCGGAA GTGCTGCTCA ATGAAGGCTA TCAAATTTCA GGCTCCGATC TGGCCGCGAA TGCGGTCACT GACCGTTTAG CTGACAAAGG CGCGACCATT TTTATTGGTC ATGAAGCGCA CAATGTTGCT CACGCAAGCG TGGTCGTGGT CTCGACGGCT ATTAATGAAC AAAACCCTGA AATCCAAGCG GCGCGTGAAA AACGCATCCC GATTGTTCGT CGTGCTGAAA TGTTGGCAGA GCTGATGCGT TTTCGCCACG GTATTGCGGT CGCGGGAACT CACGGTAAAA CCACCACGAC GGCACTCGTC ACTCAGATTT ATTCTGAAGC CGGATTGGAT CCGACCTTTG TGAATGGTGG TTTGGTGAAA AGCGCTGGCA CCAACGCACG TTTGGGCTCT AGCCGCATTT TGATCGCTGA AGCGGATGAA AGTGATGCTT CATTCTTGCA TCTGCAACCT ATGGTCACCA TTGTCACCAA TATCGAAGCG GATCATATGG ATACTTACGG CGGCGATTTT GAAAACCTTA AACAGACCTT TATCGACTTT TTGCACAATC TGCCTTTTTA CGGCCAAGCG ATTTTGTGTA TTGATGATCC AGTGATTCGT GAGCTTATTC CGCGTGTCAG CCGCCAAGTG ATCACTTATG GATTCTCAGA AGATGCCGAC GTGCGCATTG AAAATTACCG CCAGAATGGT CAGCAGGGCC AATTTACCGT GGTACGTAAA GGCAAAGCGA ATTTGGATAT CACGCTCAAT ATCCCCGGCC GTCACAATGC GCTGAATGCC GCTGCGGCTA TTGCTGTGGC TACCGAGGAC GATATTCGCG ATGAAGCGAT TTTACGCGCA ATGGCCAATA CGCAAGGCAC AGGTCGCCGT TTTGACCATC TTGGAGAGTT TGAAACCGGG AATGGCGTCG CTATGCTGGT GGATGATTAC GGTCACCACC CCACTGAAGT TGACGTGACG ATTAAAGCGG CGCGTAATGG CTGGGCAGAA AAACGCTTAG TGATGATTTT CCAGCCGCAT CGTTACACGC GAACTCGCGA TTTGTATGAT GATTTTGCCA ACGTACTTGA GCAAGTTGAT GTACTGCTCA TGCTCGATGT CTATGCTGCT GGTGAAAAGC CTATCGCAGG TGCTGATGGG CGATCTTTGT GTCGAACTAT CCGCAGCCGA GGCAAAATCG ATCCGATTTT TGTTCCGGAT AGCCAAACCT TACCTTCGGT GCTTGCCAAT ATCTTGCAGG ATGGTGACTT GGTACTGACG CAAGGCGCGG GCGATGTCGG GAAAGTAGCA AGGCATTTAG CCGCGCTTGA ACTCAATATC GGGCGTATGC AACAGATTTA A
|
Protein sequence | MTIKHTQDLA QIRAMVPEMR RVKAIHFIGI GGAGMSGIAE VLLNEGYQIS GSDLAANAVT DRLADKGATI FIGHEAHNVA HASVVVVSTA INEQNPEIQA AREKRIPIVR RAEMLAELMR FRHGIAVAGT HGKTTTTALV TQIYSEAGLD PTFVNGGLVK SAGTNARLGS SRILIAEADE SDASFLHLQP MVTIVTNIEA DHMDTYGGDF ENLKQTFIDF LHNLPFYGQA ILCIDDPVIR ELIPRVSRQV ITYGFSEDAD VRIENYRQNG QQGQFTVVRK GKANLDITLN IPGRHNALNA AAAIAVATED DIRDEAILRA MANTQGTGRR FDHLGEFETG NGVAMLVDDY GHHPTEVDVT IKAARNGWAE KRLVMIFQPH RYTRTRDLYD DFANVLEQVD VLLMLDVYAA GEKPIAGADG RSLCRTIRSR GKIDPIFVPD SQTLPSVLAN ILQDGDLVLT QGAGDVGKVA RHLAALELNI GRMQQI
|
| |