| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1974 |
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| Symbol | lpxC |
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| ID | 5135730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2117265 |
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| End bp | 2118182 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640533431 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_001217898 |
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| Protein GI | 147675593 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000000217475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAGAC AACGTACTCT GAAAGAAATA GTGAAAACAA CTGGGGTGGG CTTACACTCT
GGTCGTAAAG TTACGCTGAC TCTTCGCCCG GCCGCAGCCA ATACGGGGAT TATTTATCGT
CGTACTGACG TCAACCCACC GGTTGATTTT CCTGCCGATC CGGCTTCTGT GCGTGACACC
ATGCTTTGTA CCGCTTTGGT TAATGATCAA GGTGTACGAA TCTCTACCGT AGAGCATCTT
AATGCTGCTT TAGCAGGGAT GGGGATCGAC AATGCGATTA TCGAAGTGGA TGCACCCGAA
ATTCCAATTA TGGATGGCAG TGCGAGTCCT TTTGTTTACT TGCTGCAACA AGCGGGTATT
CAAACACTCA ATGCACCAAA ACGCTTCATC CGTATCAAGA AACCTGTACG CATTGAAGAT
GGCGATAAGT GGGCTGAATT TGTTCCATTT AACGGCTTCC GTATGGATTT CGAAATTGAG
TTCAACCACC CAGCGATTGA TGGCGATGAC CAACGCCTCG TGTTTGATTT TTCTTCACAG
GGTTTTGTGA AAGAAATCTC TCGTGCGCGT ACCTTTGGTT TTATGCGTGA TATCGAATAT
CTGCAATCAC AAAACCTCTG CTTAGGTGGT AGCTTTGATT GCGCGATCGT GCTGGATGAT
TACCGTATCC TGAATGAAGA AGGACTGCGT TTCGATAACG AGTTTGTGAC TCATAAAGTG
CTGGATGCGA TTGGTGATCT CTACATGGCT GGTCATGCGA TTGTTGGTGA GTTCCGTGCC
TACAAATCAG GCCACGGCTT GAACAACCAA CTGCTGCGTG CGGTATTGGC CGATCAAGAA
GCATGGGAAT GGGCAACCTT CGAAGAAGAA GTGGGTTCAC CTGTTGCTTT TGCTGAACCG
AACATGGTTC TCGCGTAA
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| Protein sequence | MIRQRTLKEI VKTTGVGLHS GRKVTLTLRP AAANTGIIYR RTDVNPPVDF PADPASVRDT
MLCTALVNDQ GVRISTVEHL NAALAGMGID NAIIEVDAPE IPIMDGSASP FVYLLQQAGI
QTLNAPKRFI RIKKPVRIED GDKWAEFVPF NGFRMDFEIE FNHPAIDGDD QRLVFDFSSQ
GFVKEISRAR TFGFMRDIEY LQSQNLCLGG SFDCAIVLDD YRILNEEGLR FDNEFVTHKV
LDAIGDLYMA GHAIVGEFRA YKSGHGLNNQ LLRAVLADQE AWEWATFEEE VGSPVAFAEP
NMVLA
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