Gene VC0395_A1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1960 
Symbol 
ID5137746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand+ 
Start bp2100065 
End bp2100685 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content54% 
IMG OID640533417 
Producthypothetical protein 
Protein accessionYP_001217884 
Protein GI147673769 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATACTT CTCTGCTTTA TCTGATTGAT ATGTTTGGTA CTGCCGTTTT TGCGGTTTCT 
GGAGTGCTCT TAGCGGGGCG TTTGAAAATG GATCCGTTTG GCGTCATGGT CCTCGCCAGC 
GTGACCGCAA TTGGTGGCGG CACCATTCGC GATATGGCGC TCGGAGCCAC TCCGGTATTT 
TGGATCAAAG ACACCAACTA CCTGTGGGTG ATTATGATCA CCTGCGCCCT GACCATGCTA 
CTGGTGCGTC GCCCGAAAAG ACTCGCGTGG TGGATTTTGC CCGTGTGCGA TGCGATTGGC 
CTTGCGGTTT TCGTCGGGAT CGGGGTTGAA AAAGCGCTGA TCTATCAAGA TTCCGCCTTA 
ATCGCGATCA TTATGGGCGT GATAACGGGC TGCGGCGGTG GAATTATCCG CGATGTCCTT 
GCCCGAGAAA TTCCTATGGT GCTGCGCAGT GAAGTGTACG CAACCGCCTG TATTATCGGT 
GGCATTTTCC ACACTACCGC ACTGGCGATG GGCTACAGCA GCTCGACCGC TCTGCTCTCT 
GGCGTTTTTT CCACGCTCTT AATTCGTCTC GGAGCGATCC GCTGGCACCT TTCTCTGCCA 
ACCTTTGCCC TGACCAAATA A
 
Protein sequence
MDTSLLYLID MFGTAVFAVS GVLLAGRLKM DPFGVMVLAS VTAIGGGTIR DMALGATPVF 
WIKDTNYLWV IMITCALTML LVRRPKRLAW WILPVCDAIG LAVFVGIGVE KALIYQDSAL 
IAIIMGVITG CGGGIIRDVL AREIPMVLRS EVYATACIIG GIFHTTALAM GYSSSTALLS 
GVFSTLLIRL GAIRWHLSLP TFALTK