Gene VC0395_A1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1958 
Symbol 
ID5135616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2098198 
End bp2099151 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content52% 
IMG OID640533415 
Productadenosylcobinamide-phosphate synthase 
Protein accessionYP_001217882 
Protein GI147673669 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1270] Cobalamin biosynthesis protein CobD/CbiB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACTG GGTTTTCCCA CTTTTATGCC AATGGTGCGC TCCTCGTGAT GTGGGGCGCA 
CTCTTATTTC ATCTGCTGCT GCCTATTCCT CATGCTGCGC ATCCAGTCAC TTTGTGGCAC
AAGTTTGCTG AACTGCTGGC AAGTAAGGTC AACACACCAG CCAGTTATGC ACAAAATCTC
CTGTCTGGCG CCCTCGCATG GGGTTTGATG ATTTTCCCGA CGATGGCACT TCTTTGGGCA
CTCAAACCCT TAGTCTGGCA ACCACAACTG TTTGATTTAG CGCTGCTGCT TCTGTCATTA
GATTGGCGAC GCCAAGAGAC TTTAGCCAAT CAACTGGCAC AAGCTCTCGC GAAAGAGGAC
AAGCCACAAG CACGCGCCTT ATTACAACCT TTTGTCAATC GCCAGACCAC GACACTGTCC
GCGCTGGGGC TTGGCAAGGC GGGAGTGGAA ACCTTAGTCA TGGGCTTTGG CCGTAACGTG
ATTGGCGTGC TGTTTTGGTA TGGAGTACTG GGCGGCAGCG GCGCATTCTT GTATCGCTTA
ATTGCCGAAC TGGCTCGTGC TTGGTCACCG TCGCGCACCA CCTTCCAACC GTTTGGTTTT
ACTGCGGTGC GTATTCTCGC GCTGCTTGAT TGGTTGCCAC TGCGCCTATT TAGTCTGTTG
ATTATTCTCG GTAAACAAGC GGGGACGATT TTCAAAACGG TACTCGAACA AAGCCGCAGT
TGGCCATTGC CGGGACCCGC TTGGCTACTG TGTGCGGTTG GCAATAAATT GCAGCTCGCC
TTAGGCGGCC CTGCCATTTA TGGTGAGCAA AAAAGCGTAC GCGCCAAAAT TGGCGGGCGC
ATCGCCCCAG CGGCGATTCA TATTGCGCAA GTGCAAAGCC TTATCGCGTG GCGTATTTTT
GTCTGGATTG CGCTAGAAAG TTTACTGTTA CTACTGATTT ATCGCGGAGT ATAA
 
Protein sequence
METGFSHFYA NGALLVMWGA LLFHLLLPIP HAAHPVTLWH KFAELLASKV NTPASYAQNL 
LSGALAWGLM IFPTMALLWA LKPLVWQPQL FDLALLLLSL DWRRQETLAN QLAQALAKED
KPQARALLQP FVNRQTTTLS ALGLGKAGVE TLVMGFGRNV IGVLFWYGVL GGSGAFLYRL
IAELARAWSP SRTTFQPFGF TAVRILALLD WLPLRLFSLL IILGKQAGTI FKTVLEQSRS
WPLPGPAWLL CAVGNKLQLA LGGPAIYGEQ KSVRAKIGGR IAPAAIHIAQ VQSLIAWRIF
VWIALESLLL LLIYRGV