| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1957 |
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| Symbol | pfs |
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| ID | 5136466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2097490 |
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| End bp | 2098185 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533414 |
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| Product | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
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| Protein accession | YP_001217881 |
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| Protein GI | 147673439 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0775] Nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATCG GCATCATCGG CGCAATGCAA CAAGAAGTCG CCATCCTGAA AGATCTCATC
GAAGACGTGC AAGAAGTTAA CCAAGCCGGT TGTACTTTTT ACAGCGGTCA AATCCAAGGT
GTCGACGTCG TTTTACTGCA ATCAGGCATT GGTAAAGTCT CGGCAGCATT AGGCACCGCT
TTGCTGATTA GCCAGTATGC GCCGGATGTG GTGATCAATA CGGGTTCTGC GGGCGGCTTT
GACGCAAGTT TGAATGTGGG TGATGTGGTC ATTTCAAGCG AAGTGCGCCA TCACGATGCG
GATGTGACTG CATTTGGTTA TGAAATTGGC CAAATGGCTG GCCAACCCGC CGCCTTTAAA
GCCGACGAGA AATTGATGAC AGTGGCGGAA CAAGCGCTGG CTCAATTGCC AAATACTCAT
GCGGTGCGTG GCCTTATCTG TACCGGTGAT GCGTTTGTGT GCACCGCTGA ACGTCAGCAA
TTTATTCGCC AACATTTCCC AAGCGTTGTT GCGGTAGAAA TGGAAGCCTC TGCGATTGCG
CAAACTTGTC ACCAATTCAA GGTGCCCTTT GTGGTGGTTC GCGCGATTTC TGACGTTGCT
GATAAAGAAT CTCCACTGTC GTTTGAAGAG TTCTTGCCAC TGGCCGCCAA AAGCTCTTCC
GCTATGGTGC TGAAAATGGT CGAACTGCTC AAATAA
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| Protein sequence | MKIGIIGAMQ QEVAILKDLI EDVQEVNQAG CTFYSGQIQG VDVVLLQSGI GKVSAALGTA
LLISQYAPDV VINTGSAGGF DASLNVGDVV ISSEVRHHDA DVTAFGYEIG QMAGQPAAFK
ADEKLMTVAE QALAQLPNTH AVRGLICTGD AFVCTAERQQ FIRQHFPSVV AVEMEASAIA
QTCHQFKVPF VVVRAISDVA DKESPLSFEE FLPLAAKSSS AMVLKMVELL K
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