Gene VC0395_A1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1956 
Symbol 
ID5135164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2096968 
End bp2097402 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content51% 
IMG OID640533413 
Producthypothetical protein 
Protein accessionYP_001217880 
Protein GI147674365 
COG category[S] Function unknown 
COG ID[COG4446] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCCAT CGTTTTATGC CATTATTGCT GCCTTTTCGC TTACCGCCTG CAGTCAGGGA 
GTCGATTCTA TGCCAGACCG CACCGCCACG CCTTGCGCCA ATCGACCGAA CTGTGTTTCA
ACTCAAGATG AGCGGGATAA ATTTAACCTT GCACCGTTTA TTTTGCGCCC AGGGGTCACG
ATTGAGCAGG TTGAACGGAT TGCCCTTTCT CTTCCTGGTG CGGTGACCGC TGAAAAAAAT
GCCCAGTATC TCCGTATCGA ATGCACCTCC AAAGTATTCC GCTTCGTCGA TGATCTGGAA
CTCAAAATCG AACAAGATCA CTTATGGGTT CGCTCTGAAT CGCGGATTGG CTACAGTGAT
TTTGGAGTGA ATCGTCGCCG CGCTGAAGAG CTGCGCGAAA AGCTCACGCT GTCTGGTTTA
CTTGAGCAAC CCTAA
 
Protein sequence
MHPSFYAIIA AFSLTACSQG VDSMPDRTAT PCANRPNCVS TQDERDKFNL APFILRPGVT 
IEQVERIALS LPGAVTAEKN AQYLRIECTS KVFRFVDDLE LKIEQDHLWV RSESRIGYSD
FGVNRRRAEE LREKLTLSGL LEQP