| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1955 |
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| Symbol | gltD |
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| ID | 5137791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2095366 |
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| End bp | 2096781 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640533412 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_001217879 |
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| Protein GI | 147674672 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATGAGCC AAAACGTTTA CCAATTTATC GATGTCAATC GTGTGGATCC GGCCAAAAAA
CCGCTGCACA TCCGCAAAAT TGAGTTTGTC GAAATTTACG AGCCCTTTAC TAAGCAACAA
GCCACTGCGC AGGCCGATCG CTGCCTCGAT TGTGGTAACC CTTACTGTGA ATGGAAGTGC
CCAGTACACA ACTACATTCC GCAGTGGTTA AAGCTCGCCA ATGAAGGACG CATCCTCGAA
GCGGCCGATT TGGCGCACCA GACCAACAGC CTGCCTGAAG TGTGTGGCCG AGTTTGCCCG
CAAGATAGGC TGTGCGAAGG TTCATGTACC TTGAATGCGG ATTTCGGTGC CGTCACCATT
GGCAACATCG AAAAATACAT TACGGATACC GCCTTCGAAA TGGGCTGGAA ACCCGACATG
TCCAACGTGG TCTGGACCGA CAAAAAAGTC GCGATCATCG GCGCGGGCCC AGCTGGTCTT
GCCGCCGCGG ACATTCTGGT TCGCAACGGT GTACGACCTG TCGTGTTTGA TCGCTATCCC
GAAATCGGCG GTCTGCTCAC CTTTGGCATT CCCTCATTCA AACTTGAAAA AGGGGTGATG
GAAAATCGTC GCCGCATTTT TAGCGAGATG GGTATCGAGT TTCGTCTCAA TGTCGAAGTC
GGCCAAGACA TCACACTGCA ACAACTGCTG GATGAGTACG ATGCGGTTTT TCTCGGCGTC
GGCACTTATC AATATATGCG TGCTGGCTTA GCCAACGAAG ACGCCCCCGG CGTTTATGAT
GCACTGCCGT TTTTGATCTC CAACACCTAT AAAGTGATGG AACTTAACAA CGAGGCGCCA
TTCATTGATA TGGCAGGAAA AAATGTCGTA GTGCTCGGCG GTGGTGATAC GGCGATGGAC
TGCGTGCGCA CCTCGATTCG CCAAGGCGCA TCTCGCGTGA TTTGTGCTTA TCGCCGTGAC
GAAGAAAACA TGCCCGGCTC ACGCCGTGAA GTGAAAAACG CCAAAGAAGA AGGCGTTGAA
TTTATGTTTA ACTTGCAGCC GCTGGGAATT GAAGTGAATG CCCAAGGCCA AGTGACTGGC
GTGAAAGTGG TCAAAACCGC GCTTGGAGAA CCGGATGCGG CAGGTCGTCG CAAACCTGAA
CCGGTCGCAG GCAGCGAGCA CGTCTTGTCT GCCGATGCCG TCATCATGGC GTTTGGTTTC
CAACCGCACA AAATGGCTTG GTTAGAGCCG TTTGATGTCG AGCTCGATCA GTGGGGACGC
ATCAAAGCCC CTGCCAAGCA GACTTACCAG TATCAAACCA CCAATCCCAA GATTTTTGCT
GGTGGTGATG CGGTTCGCGG CTCGGATCTG GTGGTCACGG CCATTGATGA AGGACGCAAA
GCTGCCGAGG GAATTCTCGA CTATCTTGGA GTCTAG
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| Protein sequence | MMSQNVYQFI DVNRVDPAKK PLHIRKIEFV EIYEPFTKQQ ATAQADRCLD CGNPYCEWKC
PVHNYIPQWL KLANEGRILE AADLAHQTNS LPEVCGRVCP QDRLCEGSCT LNADFGAVTI
GNIEKYITDT AFEMGWKPDM SNVVWTDKKV AIIGAGPAGL AAADILVRNG VRPVVFDRYP
EIGGLLTFGI PSFKLEKGVM ENRRRIFSEM GIEFRLNVEV GQDITLQQLL DEYDAVFLGV
GTYQYMRAGL ANEDAPGVYD ALPFLISNTY KVMELNNEAP FIDMAGKNVV VLGGGDTAMD
CVRTSIRQGA SRVICAYRRD EENMPGSRRE VKNAKEEGVE FMFNLQPLGI EVNAQGQVTG
VKVVKTALGE PDAAGRRKPE PVAGSEHVLS ADAVIMAFGF QPHKMAWLEP FDVELDQWGR
IKAPAKQTYQ YQTTNPKIFA GGDAVRGSDL VVTAIDEGRK AAEGILDYLG V
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