| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1952 |
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| Symbol | gltB-1 |
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| ID | 5135978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2084297 |
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| End bp | 2088889 |
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| Gene Length | 4593 bp |
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| Protein Length | 1530 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640533409 |
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| Product | glutamate synthase, large subunit |
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| Protein accession | YP_001217876 |
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| Protein GI | 147674370 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCACACTC AGTGCGGTTG CGTCCTCAAT AACTGGAAGG ATGTATCTAT GGTAGATAAA
GCGCAACGTT CGCGTGGTCT TTATACGCCT GAGCTGGAGC ATGATGCTTG TGGCATCGGC
TTTGTCGCTC ACCTGAAAAA TCGCAAGTCT CATCAGGTGG TCACTCAAGC TTTGGACATG
CTCGCACGCA TGGAACACCG TGGCGGTCAG GGTTGTGACC CTTGCAGCGG TGACGGTGCG
GGTATTTTGT TGCAAAAACC TCACGAATTT TTACTCGAAG AAGCGGTTAA ACTGGGGATC
AAGCTGCCTT CATTCGAAAA GTACGGTGTT GGTGTGGTGC TGTTCCCGAA AGATGAACAT
AAACGCGCCC AATGCCGCGA CATTCTAGAA CGCAATGCCA AACGCCTTGA TCTGGATGTG
ATTGGCTACC GCGTTTTACC GACCAATAAC AGCATGTTGG GTGCCGACCC CCTCAGTACC
GAACCACAAT TTGAACACGT GTTTATTTCT GGCGGCCCGG GTATGCAGCC TGACGAGCTA
GAACGCAAGC TGTACGTGCT GCGTAACTAC ACCGTTCGCG TCTGCCTTGA GAGCGTGTCG
AACATCGGTG ATGATTTTTA TATCAACTCG ATGTCGTACA AAACCTTGGT CTATAAAGGT
CAGTTGACTA CAGAGCAAGT ACCGCAATAC TTCCTCGACT TGCAAAATCC GACCATGGTG
ACAGCGTTAG CACTGGTGCA CTCGCGTTTT TCGACCAACA CCTTCCCGAA ATGGCGACTG
GCTCAACCTT TCCGCTACAT CGCGCACAAC GGTGAGATCA ACACGGTTCG CGGTAACTTG
AACTGGATGA AAGCGCGCGA AGCGATTTTA CAATCCAAGC TGTTTACTCA AGCTGAAATC
GATATGCTGC TGCCTATCTG CCAAGAAGGC GCATCCGATT CGGCTAACTT TGACATGGTA
CTCGAACTGC TGGTGCTTTC CGGTCGCAGC TTGCCTCACG CTCTGATGAT GATGATCCCA
GAAGCATGGC AAGAAAACAA AGCGATGGAT CCTAAGCGCC GCGCCTTCTA TCAATACCAC
GCTAACGTCA TGGAACCTTG GGACGGCCCA GCATCAGTGT GCTTTACCGA TGGGGTACAA
GTAGGCGCCA CACTGGATCG TAACGGTCTG CGTCCGTCTC GTTATACCGT GACCAAAGAC
GATTTTCTGA TCATGGCTTC CGAATCTGGC GTCGTGGAAA TTGATCCGGC CAATGTGGAA
TACCGTGGTC GTCTGCAACC GGGACGTATC TTTGTTGCCG ACTTAGAACA AGGCCGTATT
ATCTCAGATG AAGAGGTGAA AGACGGTATC GCTTCGGCGC AGCCTTATGA AAAATGGGTA
GAAGAAAACC TACTCAGTTT GAAAAAACTG CCGGATGCCG ACAACGTACA TAGCCAACCG
TCGCCAGAGC GTCTCCTCCA TCGCCAACAA GCGTTTGGGG TGAGTAGCGA AGAGGTCAAT
GACATCATTC TGACTCTCGC GCAAACTGGT TATGAGCCGC TCGGTTCGAT GGGGGCAGAC
TGGCCGGTCG CCGTGCTGTC ACACCAATCT CAGCATCTCT CCAACTACTT CAAGCAGTTG
TTTGCCCAAG TGACCAACCC ACCGATCGAC CCGATCCGTG AACGCATGGT GATGTCGCTC
AACACTTATA TCGGCCGCGA TCAAAACTTG CTAGCAGAAA CCCCTGCGCA CTGTCGTAAG
GTCGAATTGG AATCGCCGGT CATTTCTAAT GCTGAGCTTG AGAAAATCCG GGCAATCGAT
AACGAGCACT TGCAAGCCAA AACCTTAGAC ATCGTATTTC GTGCCAGCGA TGAACCGGGC
AAGCTCGAAC GCGCTCTGAA ACGTATTTGC CAATACGCGG AAGATGCGGT GATTGATGGC
TATTCGATCA TTTTGCTGAC CGACCGCGCG GTAAACTCCA ACCACGCCGC CATCCCAGCC
ATGCTGGCTG TAGGCGCGGT GCACCATCAC CTGATCCGCA AAGGTCTGCG TTCGAAATGC
GGCATTGTGG TGGAAACTGG TGATGCGCGT GAAACGCACC ACTTTGCAAC CCTACTCGGC
TACGGTGCAA ACGCAGTCAA CCCGTATCTA GTGGTGGAAA CCATCGTCGA TCTCAAGCGT
CAGAAGAAAC TCGATGCCGA TGTTTCGGTA GAGAAATACT TCGAGAATTA CCGTAAAGGC
GTGAACGGCG GTCTGTTGAA GATCTTCTCT AAAATGGGGA TTTCGACGCT GCAGTCTTAT
CACGGTGCAC AGATTTTTGA AGCGCTCGGG ATCAGTAAAG CGGTGGTCGA TAAATACTTC
ACTGGCACCA TCACCCGTAT TCAAGGTTTG ACCCTCGACG ACATCGCTAA AGAAGTGTTG
GTTCGTCATC GCATTGGTTA CCCAACGCGT GAAATCCCAC TGCAAGTGCT GGATGTCGGC
GGCGTGTATC AATGGAAACA GCGTGGTGAG CAGCATCTGT TTAACCCAGA AACGATTCAC
CTGCTGCAAG AATCGACTCG CCACAAAAAT TATCAGCAGT TCAAGAAGTA CGCAGCCGCG
GTGGATAGCC AAGGCGATAA AGCCGTTACT CTGCGCAGTC AGCTTGATTT TGTGAAAAAT
CCAGCGGGTT CCATTCCGAT TGAGGAAGTG GAACCGATCG AGAGCATTGT GAAGCGCTTT
GCCACCGGTG CGATGTCGTT TGGGTCTATC TCTTACGAAG CGCACTCCAC ACTGGCGATT
GCGATGAACC GTCTAGGCGC GAAATCCAAC TCCGGTGAAG GTGGTGAAGA CCCAATGCGT
TTTGAGCTAA ATGCCAACGG TGATTCAGAG CGTTCAGCGA TCAAGCAAGT AGCATCTGGC
CGTTTCGGCG TGACCTCTTA CTATCTGACC AACGCAGATG AAATCCAGAT CAAGATGGCG
CAAGGGGCGA AACCGGGCGA AGGTGGTCAG CTACCGGGTG ATAAAGTCGA TGAATGGATC
GGGGCAACTC GTCACTCGAC ACCGGGCGTC GGCCTGATTT CGCCACCACC GCACCACGAC
ATTTACTCTA TCGAAGACTT AGCCCAGCTG ATTTTCGATC TGAAAAACGC CAACCGCAAA
GGTCGCGTCA ACGTCAAACT GGTTTCTGAA GCCGGTGTCG GCACCATCGC ATCGGGTGTG
GCTAAAGCCA AAGCTGACGT AGTACTGATT GCCGGTCACG ATGGCGGTAC GGGTGCATCA
CCCATCTCTT CTATCCGTCA TACCGGTTTA CCTTGGGAAC TGGGTCTGGC TGAAACCCAC
CAGACTCTGC TCAAAAACGG CCTGCGTAAC CGCATTGTGG TGCAAGCCGA TGGACAGATG
AAAACCCCAC GCGATATCGC GATTGCGGTA CTGTTGGGCG CTGAAGAATG GGGCGTCGCA
ACCGCTGCAC TGGTGGTTGA AGGCTGTATC ATGATGCGTA AATGTCATAA AAACACTTGC
CCTGTCGGTA TCGCCACACA AAACAAAACT CTGCGTGAGC GTTTTGCTGG CCGTGTGGAT
GACGTTGTGA CCTTCTTCCA ATACATGGCA CAAGGCCTGC GTGAAATCAT GGCTGAGCTC
GGTTTCCGCA CCATTAACGA AATGGTTGGC CAAGCGCACA AACTCAAAGT GCGTGATGAT
ATTGGCCACT GGAAGTACAA AAACCTCGAT CTGTCGCCGA TCCTCTTTAT TGAGCAGCCG
CGCAGCGAAG ATGGTATTTA CTGCCAGACT CAGCAGAACC ACCAGCTCGA AAGCATACTG
GATCGCACCT TGATCCAATT AGCAACGCCT GCCCTTGAGC GTGGTGAAGC GGTCAAAGCA
GAGCTACCGA TCATCAACAC CGATCGCAGT ACCGGCACCA TGTTGTCTAA CGAAATCTGT
AAGGTTTACA AAGACCAAGG TCTACCACAG CCAATGCAGG TGAAATTCAA CGGCAGTGCG
GGACAATCTT TCGGGGCATT CCTCACTAAA GGCGTTTACT TTGAAGTGGA AGGCGATGCT
AACGACTACT GGGGCAAAGG TCTTTCTGGT GGCACGCTGG TGCTCTACCC GAACCGTAAC
GCCACCATAG TTCCGGAAGA GAACATTGTA GTCGGTAACG TCTGTTTCTA CGGCGCAACC
TCTGGCGAAT CTTACATTCG CGGCCTAGCG GGCGAGCGTT TCTGCGTGCG TAACTCAGGT
GCCAAAGTGG TGGTGGAAGG TATCGGCGAT CACGGCTGTG AATACATGAC CGGCGGTGTC
GCAGTGATCC TCGGTTCAAC CGGCCGTAAC TTCGCCGCAG GTATGAGTGG CGGTGTGGCT
TACGTGTGGG ATAAATCTGG CGACTTCCAA TCTAAGCTCA ATGCAGAATT GGTTGATCTG
GACCCTATCG AAGCGGAAGA CAGAGCCCTA CTCAAAGAGA TGTTAACCAA GCATGTTCAA
TTCACAGGAA GTGAAGTGGC CAAAGCTTTC CTTGCCAACT TTGACGCAAG CCTAGCCACT
ATGGTCAAGG TCATGCCGCG TGATTACAAA GCGGTACTGC AAAAGCGTAA AGCACAGGAG
CAACAAGCCA CATTAGCAGC GGAGGCGGTA TAA
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| Protein sequence | MHTQCGCVLN NWKDVSMVDK AQRSRGLYTP ELEHDACGIG FVAHLKNRKS HQVVTQALDM
LARMEHRGGQ GCDPCSGDGA GILLQKPHEF LLEEAVKLGI KLPSFEKYGV GVVLFPKDEH
KRAQCRDILE RNAKRLDLDV IGYRVLPTNN SMLGADPLST EPQFEHVFIS GGPGMQPDEL
ERKLYVLRNY TVRVCLESVS NIGDDFYINS MSYKTLVYKG QLTTEQVPQY FLDLQNPTMV
TALALVHSRF STNTFPKWRL AQPFRYIAHN GEINTVRGNL NWMKAREAIL QSKLFTQAEI
DMLLPICQEG ASDSANFDMV LELLVLSGRS LPHALMMMIP EAWQENKAMD PKRRAFYQYH
ANVMEPWDGP ASVCFTDGVQ VGATLDRNGL RPSRYTVTKD DFLIMASESG VVEIDPANVE
YRGRLQPGRI FVADLEQGRI ISDEEVKDGI ASAQPYEKWV EENLLSLKKL PDADNVHSQP
SPERLLHRQQ AFGVSSEEVN DIILTLAQTG YEPLGSMGAD WPVAVLSHQS QHLSNYFKQL
FAQVTNPPID PIRERMVMSL NTYIGRDQNL LAETPAHCRK VELESPVISN AELEKIRAID
NEHLQAKTLD IVFRASDEPG KLERALKRIC QYAEDAVIDG YSIILLTDRA VNSNHAAIPA
MLAVGAVHHH LIRKGLRSKC GIVVETGDAR ETHHFATLLG YGANAVNPYL VVETIVDLKR
QKKLDADVSV EKYFENYRKG VNGGLLKIFS KMGISTLQSY HGAQIFEALG ISKAVVDKYF
TGTITRIQGL TLDDIAKEVL VRHRIGYPTR EIPLQVLDVG GVYQWKQRGE QHLFNPETIH
LLQESTRHKN YQQFKKYAAA VDSQGDKAVT LRSQLDFVKN PAGSIPIEEV EPIESIVKRF
ATGAMSFGSI SYEAHSTLAI AMNRLGAKSN SGEGGEDPMR FELNANGDSE RSAIKQVASG
RFGVTSYYLT NADEIQIKMA QGAKPGEGGQ LPGDKVDEWI GATRHSTPGV GLISPPPHHD
IYSIEDLAQL IFDLKNANRK GRVNVKLVSE AGVGTIASGV AKAKADVVLI AGHDGGTGAS
PISSIRHTGL PWELGLAETH QTLLKNGLRN RIVVQADGQM KTPRDIAIAV LLGAEEWGVA
TAALVVEGCI MMRKCHKNTC PVGIATQNKT LRERFAGRVD DVVTFFQYMA QGLREIMAEL
GFRTINEMVG QAHKLKVRDD IGHWKYKNLD LSPILFIEQP RSEDGIYCQT QQNHQLESIL
DRTLIQLATP ALERGEAVKA ELPIINTDRS TGTMLSNEIC KVYKDQGLPQ PMQVKFNGSA
GQSFGAFLTK GVYFEVEGDA NDYWGKGLSG GTLVLYPNRN ATIVPEENIV VGNVCFYGAT
SGESYIRGLA GERFCVRNSG AKVVVEGIGD HGCEYMTGGV AVILGSTGRN FAAGMSGGVA
YVWDKSGDFQ SKLNAELVDL DPIEAEDRAL LKEMLTKHVQ FTGSEVAKAF LANFDASLAT
MVKVMPRDYK AVLQKRKAQE QQATLAAEAV
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