Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1946 |
Symbol | |
ID | 5135754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 2077084 |
End bp | 2077467 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640533403 |
Product | hypothetical protein |
Protein accession | YP_001217870 |
Protein GI | 147675746 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0000222143 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAGA TTGACGCTAG CCTTTGGCTG GCCTACCAAA GCGTGAAATT TGCCTTTGAA AAGCCAGTAA ATTGGCCATT TTACTGCATA ATTACCGCAT GGAACCCTGA GAGTATTCGC TTGTCAGATG ATGAGAATTG CGTAAATAAT CAACGTTTAC AGCAATGCTT GATCGATTAT GATTGGGTGA AAGTGAGGGT AGGAGACGCT CATTTTCACT GGTTTGAAGA GAGTTTTGCG GTCGTAATGC CGCTTTCAGA AGCCCGAAAA TTGGCGCAGA GATTTGCTCA AAACGCGATC TATTTTGTAC AAGACGGCGA CCTTTATCTC TGTTCTTGTG TTGATGAGAG CGAGCTTCAT CTCGGGCCAA TAGGGAAACA ATAG
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Protein sequence | MIKIDASLWL AYQSVKFAFE KPVNWPFYCI ITAWNPESIR LSDDENCVNN QRLQQCLIDY DWVKVRVGDA HFHWFEESFA VVMPLSEARK LAQRFAQNAI YFVQDGDLYL CSCVDESELH LGPIGKQ
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