Gene VC0395_A1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1946 
Symbol 
ID5135754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2077084 
End bp2077467 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content44% 
IMG OID640533403 
Producthypothetical protein 
Protein accessionYP_001217870 
Protein GI147675746 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0000222143 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAAGA TTGACGCTAG CCTTTGGCTG GCCTACCAAA GCGTGAAATT TGCCTTTGAA 
AAGCCAGTAA ATTGGCCATT TTACTGCATA ATTACCGCAT GGAACCCTGA GAGTATTCGC
TTGTCAGATG ATGAGAATTG CGTAAATAAT CAACGTTTAC AGCAATGCTT GATCGATTAT
GATTGGGTGA AAGTGAGGGT AGGAGACGCT CATTTTCACT GGTTTGAAGA GAGTTTTGCG
GTCGTAATGC CGCTTTCAGA AGCCCGAAAA TTGGCGCAGA GATTTGCTCA AAACGCGATC
TATTTTGTAC AAGACGGCGA CCTTTATCTC TGTTCTTGTG TTGATGAGAG CGAGCTTCAT
CTCGGGCCAA TAGGGAAACA ATAG
 
Protein sequence
MIKIDASLWL AYQSVKFAFE KPVNWPFYCI ITAWNPESIR LSDDENCVNN QRLQQCLIDY 
DWVKVRVGDA HFHWFEESFA VVMPLSEARK LAQRFAQNAI YFVQDGDLYL CSCVDESELH
LGPIGKQ