Gene VC0395_A1937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1937 
Symbol 
ID5136655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp2067476 
End bp2068117 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content43% 
IMG OID640533394 
Producthypothetical protein 
Protein accessionYP_001217861 
Protein GI147675579 
COG category[S] Function unknown 
COG ID[COG3945] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000015412 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTGG CGTTTTTTCG ACCAGTTTCA AAGCCGATAT ATCAATCCTT ATGTACACTT 
TACCTTAGTA CAAGTATGGA GATTGATAAG ATGATGATGG AACGAATCCG CCGCGAGCAC 
AGTTATATGG TGCGTTTGTT GTCGATTTTA CGCCACAAAT TGGATCTGGT GAAAAGCGAG 
CAACCGATCA ACTACAGCCT TCTGAAAGAA ATCGTTGATT ATTTAGCAAG CCATTCAGAG 
AAAGTGCATC ACCCGAAAGA GGACATTCTG TACCGCCACT ACATGGCACA TTACGGCGAT 
GAACAGCAAG TGGCTAATTT GGAGCGTGAA CATCAAGAGT TGGCGCAAAT TACCCATCAG 
TTTCTCGATG TCATGGAGAT GATTTTAAAC GATGCGGTTG TGCCACAAGA TGTGTTTATT 
GAGCAACTGG AGGCCTTTCT ACAAGGTCAA AAACAGCATT TAGAGTTGGA AGAACAATCG 
ATTTTGCCAT TGATTAATCA AACGTTTGAA TTAGAAGATT GGCAGAACGT TGAGTCGCAA 
TGGCAAAACA ACGATGATGA TCCGGTATTC GGTGAAACGA TCGCTGAGCG ATATGCGCTT 
TTGGCTCGCC GTGTTCGTAA AAGTGAGAGT GAATACACCT AA
 
Protein sequence
MQLAFFRPVS KPIYQSLCTL YLSTSMEIDK MMMERIRREH SYMVRLLSIL RHKLDLVKSE 
QPINYSLLKE IVDYLASHSE KVHHPKEDIL YRHYMAHYGD EQQVANLERE HQELAQITHQ 
FLDVMEMILN DAVVPQDVFI EQLEAFLQGQ KQHLELEEQS ILPLINQTFE LEDWQNVESQ 
WQNNDDDPVF GETIAERYAL LARRVRKSES EYT