| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1931 |
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| Symbol | |
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| ID | 5135338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2061684 |
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| End bp | 2062940 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640533388 |
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| Product | NupC family protein |
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| Protein accession | YP_001217855 |
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| Protein GI | 147673370 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000124283 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTGT TTATGAGCCT CATCGGCATG GCAGTTCTGC TAGGAATCGC AGTTCTACTG
TCAAGTAACC GTAAAGCTAT CAATCTAAGA ACTGTGGGTG GCGCTTTTGC TATCCAATTT
TCACTGGGTG CATTTATTCT GTATGTGCCT TGGGGCCAAG AGCTACTTCG TGGCTTTTCG
GATGCCGTAT CGAATGTTAT TAACTACGGT AACGATGGTA CTTCATTCCT CTTCGGTGGA
CTGGTATCAG GCAAAATGTT TGAAGTGTTT GGCGGCGGCG GTTTCATTTT CGCATTCCGC
GTACTACCAA CACTGATCTT CTTCTCAGCA CTGATTTCTG TACTGTACTA CTTGGGTGTT
ATGCAATGGG TTATCCGCAT TCTTGGCGGT GGTCTGCAAA AAGCACTGGG TACATCACGC
GCGGAATCTA TGTCTGCGGC TGCAAACATT TTCGTGGGTC AAACTGAAGC ACCATTAGTT
GTTCGTCCAT TCGTTCCAAA AATGACTCAA TCTGAGCTGT TTGCGGTAAT GTGTGGTGGC
TTGGCTTCTA TCGCAGGTGG TGTACTTGCG GGTTACGCTT CAATGGGCGT TAAGATCGAA
TACTTGGTAG CGGCGTCATT CATGGCGGCA CCGGGTGGTC TGCTGTTCGC AAAACTGATG
ATGCCTGAAA CTGAAAAACC ACAAGACAAT GAAGACATTA CTCTTGATGG TGGTGACGAC
AAACCGGCTA ACGTTATCGA TGCGGCTGCT GGCGGTGCTT CTGCTGGTCT GCAACTTGCT
CTGAACGTTG GTGCAATGTT GATTGCCTTT ATCGGTTTGA TTGCTCTGAT CAACGGTATG
TTGGGTGGCA TCGGTGGTTG GTTCGGTATG CCTGAACTGA AACTGGAAAT GCTACTGGGC
TGGTTGTTTG CGCCTCTGGC TTTCCTGATC GGTGTTCCTT GGAACGAAGC AACTGTTGCG
GGTGAGTTCA TCGGTCTAAA AACCGTTGCT AACGAATTCG TTGCTTACTC TCAGTTTGCG
CCTTACCTGA CTGAAGCGGC ACCAGTGGTT CTGTCTGAGA AAACCAAAGC GATCATCTCT
TTCGCTCTGT GTGGTTTTGC GAACCTTTCT TCTATCGCAA TTCTGCTTGG TGGTTTGGGT
AGCTTGGCAC CTAAGCGTCG TGGCGACATC GCTCGTATGG GGGTCAAAGC GGTTATCGCA
GGTACTCTAT CTAACCTGAT GGCAGCGACC ATCGCTGGCT TCTTCCTCTC TTTCTAA
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| Protein sequence | MSLFMSLIGM AVLLGIAVLL SSNRKAINLR TVGGAFAIQF SLGAFILYVP WGQELLRGFS
DAVSNVINYG NDGTSFLFGG LVSGKMFEVF GGGGFIFAFR VLPTLIFFSA LISVLYYLGV
MQWVIRILGG GLQKALGTSR AESMSAAANI FVGQTEAPLV VRPFVPKMTQ SELFAVMCGG
LASIAGGVLA GYASMGVKIE YLVAASFMAA PGGLLFAKLM MPETEKPQDN EDITLDGGDD
KPANVIDAAA GGASAGLQLA LNVGAMLIAF IGLIALINGM LGGIGGWFGM PELKLEMLLG
WLFAPLAFLI GVPWNEATVA GEFIGLKTVA NEFVAYSQFA PYLTEAAPVV LSEKTKAIIS
FALCGFANLS SIAILLGGLG SLAPKRRGDI ARMGVKAVIA GTLSNLMAAT IAGFFLSF
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