| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1927 |
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| Symbol | deoB |
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| ID | 5135308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2057631 |
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| End bp | 2058851 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640533384 |
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| Product | phosphopentomutase |
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| Protein accession | YP_001217851 |
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| Protein GI | 147674309 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1015] Phosphopentomutase |
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| TIGRFAM ID | [TIGR01696] phosphopentomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAG CATTTATTTT AGTTTTAGAC TCGTTTGGCA TTGGCGCAAC AGCGGATGCA
CAAGCCTTTG GTGATGTCGG TTCTGATACC TTAGGCCACA TCGCGGATCA ATGTGCGCAA
GGTTTGGCGG ATAACGCAGA ACGTAAAGGC GCATTGCAAC TGCCGAACCT TTCTAAGCTG
GGTTTGGCGA TGGCGCATAA AGAGTCGACC GGACGTTTTG CGCCGGGGCT GGATGAGCGT
GCGGATATCA TCGGCGCTTA TGCCCATGCC GCAGAGCTGT CATCAGGCAA AGATACTCCG
TCAGGTCACT GGGAAATTGC TGGTGTGCCA GTGCTGTTTG AATGGGGTTA CTTTAGCGAT
AAGCAAAATA GCTTCCCGAA AGAGCTGACC GATCGCATTT TAGCGCGCGC GGGTTTGGAC
GGATTTTTAG GCAACTGCCA CGCCTCTGGT ACGCAAGTGC TGGATGATTT GGGCGAAGAG
CATATGCGTA CGGGCAAGCC GATTTTCTAC ACCTCGGCAG ATTCTGTATT CCAAATTGCC
TGCCACGAAG AGACATTTGG TTTAGCTCGT CTGCTGGAGC TTTGCCAAAT CGCTCGTGAA
GAGCTGGCGG ATTACAACAT CGGTCGCGTC ATTGCGCGTC CATTCGTTGG CCCGGGCAAA
GGACAATTTG CTCGTACCGG TAATCGCCGT GATTTGTCGG TTGAGCCCCC TTCAGCCACA
GTGTTGCAAA AGTTGGTGGA AGAGAAGCAA GGCCGAGTGG TGTCTATCGG TAAAATTGCC
GATATCTACG CGTACTGCGG CATTACCGAC AAAGTCAAAG CGACGGGCAT TCCAGATCTG
TTTGAAGCGA CTTTAGAGCA GATCAAACAA GCCGGTGATA ACACCATCGT ATTCACTAAC
TTTGTGGATT TTGACTCGGC TTATGGTCAC CGCCGTGATG TCGCAGGTTA TGCGGCGGCA
CTGGAGTATT TCGATAAGCG TTTACCTGAA GTTCTAGCGC TGATGCAGGA AGATGACATT
CTGATTTTAA CTGCCGACCA CGGCTGTGAC CCAACATGGC CGGGCACTGA CCATACTCGT
GAACACATTC CGGTACTGGT TTATGGCAAG AAAGTGGCTC CGGGTTCATT AGGTCGTCGT
GACACTTTTG CTGATATCGG GCAAACTCTG GCAAGCTACT TTGGCACTTC GCCAATGGAT
TACGGTAAGA ACTTTTTATA A
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| Protein sequence | MKRAFILVLD SFGIGATADA QAFGDVGSDT LGHIADQCAQ GLADNAERKG ALQLPNLSKL
GLAMAHKEST GRFAPGLDER ADIIGAYAHA AELSSGKDTP SGHWEIAGVP VLFEWGYFSD
KQNSFPKELT DRILARAGLD GFLGNCHASG TQVLDDLGEE HMRTGKPIFY TSADSVFQIA
CHEETFGLAR LLELCQIARE ELADYNIGRV IARPFVGPGK GQFARTGNRR DLSVEPPSAT
VLQKLVEEKQ GRVVSIGKIA DIYAYCGITD KVKATGIPDL FEATLEQIKQ AGDNTIVFTN
FVDFDSAYGH RRDVAGYAAA LEYFDKRLPE VLALMQEDDI LILTADHGCD PTWPGTDHTR
EHIPVLVYGK KVAPGSLGRR DTFADIGQTL ASYFGTSPMD YGKNFL
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