| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1926 |
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| Symbol | deoD |
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| ID | 5137777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2056823 |
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| End bp | 2057548 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640533383 |
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| Product | purine nucleoside phosphorylase |
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| Protein accession | YP_001217850 |
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| Protein GI | 147673694 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0813] Purine-nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAACTC CACATATTAA TGCGCAAATG GGTGATTTCG CTGACGTTGT ACTGATGCCG
GGTGATCCGC TGCGCGCGAA ATACATCGCA GAAAACTTCC TCGATAACGC AGTTCAAGTA
TGTGATGTGC GCAATATGTT CGGCTACACA GGCACTTACA AAGGCCGCAA GATCTCTGTG
ATGGGGCATG GTATGGGTAT CCCATCTTGC TCAATCTATG TAACCGAGCT TATCAAAGAT
TACGGCGTGA AAAAGATTAT CCGCGTCGGT AGCTGTGGTG CAGTGAACGA AGGCATCAAA
GTGCGTGATG TGGTGATCGG TATGGGCGCG TGTACTGACT CTAAAGTCAA CCGTATTCGC
TTCAAAGATC ATGATTTTGC TGCGATTGCG GATTACAAGA TGGTAAAAGC TGCAGAAGAA
GCGGCCAAAG CACGTGGCAT TGACGTGAAA GTTGGCAACC TGTTCTCTGC AGAACTGTTC
TACACGCCAG ATCCTTCCAT GTTCGATGTG ATGGATAAAT ACGGCATCGT TGGCGTAGAA
ATGGAGGCGG CAGGCATTTA CGGTGTAGCG GCGGAATACG GCGCGAAAGC ACTGGCGATC
TGTACTGTGT CTGACCACAT CAAAACGGGC GAGCAAACCA CCTCAGAAGA GCGTCAAAAC
ACCTTCAATG AGATGATTGA AATCGCACTG GACTCTGTAC TGATTGGTGA TCAAGCGGGT
TACTAA
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| Protein sequence | MATPHINAQM GDFADVVLMP GDPLRAKYIA ENFLDNAVQV CDVRNMFGYT GTYKGRKISV
MGHGMGIPSC SIYVTELIKD YGVKKIIRVG SCGAVNEGIK VRDVVIGMGA CTDSKVNRIR
FKDHDFAAIA DYKMVKAAEE AAKARGIDVK VGNLFSAELF YTPDPSMFDV MDKYGIVGVE
MEAAGIYGVA AEYGAKALAI CTVSDHIKTG EQTTSEERQN TFNEMIEIAL DSVLIGDQAG
Y
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