| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1920 |
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| Symbol | |
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| ID | 5135897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2046821 |
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| End bp | 2048512 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640533377 |
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| Product | putative long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001217844 |
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| Protein GI | 147673766 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.022094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGAATGA TCCAGCCTAA TCAGTTCAAT CACCCTCCTT GTGCTCTCCC ACCACCCAAT
GAGATGTTGC TGCGTTGGGC TAAAGAGCGT CCGAATGAGG TGTACCTAAA ACAGATTATT
AACCGCCAAT TTGTTGAGTT TACTTACGCC GAAGTTGCGG ATAAGGCTCT ACGCCTCGTT
TCCGCTTTGC GAGCCTTAGG GGCTGATCCG GGCGATAAAG TTGCATTAAT TTCAAAAAAC
TGTGCGGAAT GGTTTATTTG CGATTTAGCC ATGATGCTCG GGGATTACAT CAGTGTGCCT
ATCTTCCCGA CAGCAGGCAG TGAGACTATC GATTACTGCC TTGAGCACAG TGAAAGTAAA
ATCCTGATCG TCGGCAAGCT GGATGATAAT AAAGCCACTG CGCATGTGTT AGCAGAGCGT
CCTAATCTTA TCAGTATCTC GCTTCCTTAT CCTTCGGCAG CCAAATGCCA ATATGAGTTT
CAAACGCTGA TCAAACAGCA TCAACCCAGT GAAGAGCGCC CCACCCACTT TGATGAAAAA
CTGATGTCCA TCGTTTATAC CTCTGGTACA TCAGGACAAC CGAAAGGTGC CATGCTCACT
TATGGCGCAT TTACTTGGTC CGCCCAACAA CTGATCAACC ACATAGGCAT CGAAGAAAAC
GATCGACTTT TCTCATATCT GCCACTCGCT CATATCACTG AGCGAGTTTA TATTTTTGGT
TCATCGATCA TCGGTGGCGT ACTGACCGCA TTTCCGGAAT CTCTCGATAC CTTTATCGAA
GATGTCAAAA TGCACCGCCC AACCCTGTTT ATTTCTGTAC CTCGTTTATG GACACTGTTC
CAACAACGCA TCCAAGATAA ACTGCCGCAG AAAAAGCTGA ATATTCTGCT CAAAATCCCC
TTCGTCAACT CACTCATCAA ACGTAAGTTG GCCGATGGTT TAGGGCTAGA TCAAGCTCGC
GTGCTCGGTT GTGGCTCCGC ACCAGTCTCC CCAGCATTAC TCGAATGGTA TCGCAGTGTC
GGACTAAACA TTACCGAAGC GTGGGGCATG ACGGAATCCT TTGCATACAG CACACTCAAC
TATCCATTCC GTGCTGACAA AATCGGCACT GTGGGTAATG CTGGACCGGG CATTGAACTG
AAAATCGCGG AGGATGAAGA AATCTTAGTC CGCAGCAAAG GCTTGTTTGC TGGCTACTAT
AAAAATGACA CCGCGACAGC CGAAAGCTTT AACGATGACG GTTGGTTACA TACTGGCGAT
ATCGGGTCAT TGGACAGTGA AGGCTATTTA ACCATTCAAG GTCGTAAAAA AGACACCTTT
AAAACCGCTA AAGGCAAGTT CGTCGCCCCC GTTCCTATCG AGAAAAAGCT GTTTGAATAC
AGCCGAGTTG AGATGATGTG CTTGATCGGC TCTGGTCTCC CAGCCCCCAT CTTGTTAGCC
GTTCCGCACA ATTTTCCTCA CTTTGATCGT GCGCGTTATG AACGCACCAC CCAAAAAGTG
ATAGCACGCA TCAATAGTGA ATTGGAATCT CACGAACAAA TTAAAGGGGT GTTAATGATT
AAAGATCCTT GGAGCATTGA TAACGGCATC TTAACGCCAA CGCTCAAGAT CAAACGTCAT
GTTCTAGAGA AGAAATATCA CGATGTCGGC CAAAACTGGC CTAAAGGTCA GCTCGTCGTT
TGGGAAGAGT AA
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| Protein sequence | MRMIQPNQFN HPPCALPPPN EMLLRWAKER PNEVYLKQII NRQFVEFTYA EVADKALRLV
SALRALGADP GDKVALISKN CAEWFICDLA MMLGDYISVP IFPTAGSETI DYCLEHSESK
ILIVGKLDDN KATAHVLAER PNLISISLPY PSAAKCQYEF QTLIKQHQPS EERPTHFDEK
LMSIVYTSGT SGQPKGAMLT YGAFTWSAQQ LINHIGIEEN DRLFSYLPLA HITERVYIFG
SSIIGGVLTA FPESLDTFIE DVKMHRPTLF ISVPRLWTLF QQRIQDKLPQ KKLNILLKIP
FVNSLIKRKL ADGLGLDQAR VLGCGSAPVS PALLEWYRSV GLNITEAWGM TESFAYSTLN
YPFRADKIGT VGNAGPGIEL KIAEDEEILV RSKGLFAGYY KNDTATAESF NDDGWLHTGD
IGSLDSEGYL TIQGRKKDTF KTAKGKFVAP VPIEKKLFEY SRVEMMCLIG SGLPAPILLA
VPHNFPHFDR ARYERTTQKV IARINSELES HEQIKGVLMI KDPWSIDNGI LTPTLKIKRH
VLEKKYHDVG QNWPKGQLVV WEE
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