| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1918 |
|---|
| Symbol | |
|---|
| ID | 5136743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 2044189 |
|---|
| End bp | 2045331 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640533375 |
|---|
| Product | putative transporter |
|---|
| Protein accession | YP_001217842 |
|---|
| Protein GI | 147675324 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2059] Chromate transport protein ChrA |
|---|
| TIGRFAM ID | [TIGR00937] chromate transporter, chromate ion transporter (CHR) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAACGA TTTTTAGAAC TTTTTTTGCT CTCGGATGGG TGAGTTTTGG TGGGCCAGCC
GCACATATAG GTTACTTTCG CCACACCTTT GTTGAGAAAT TACGCTGGGT TAGCGAGCAA
GAATATGCAC AATTTGTGGC ACTGAGCCAG TTCCTTCCTG GCCCCGGTTC TAGCCAAGTT
GGTTTTGCGA TTGGTTATCA TCGTGGTGGT CTGGCTGGCG CTTGGGCAGC GTTTCTCGGT
TTTACCCTTC CCTCCGTGCT CATCATGCTG CTGCTCGCGG GGCTAAGCAG CCATCTCCTT
GATACCCCAC TGTTTGAACA AATGATTCAT GGCTTGAAGC TACTCGCGAT CATAGTGGTG
GCCGATGCTT GTTTAACCAT GTATCGCAAT TTTTGTCAGC AACGCCTTAC TGCAGGGTTA
TGTGTTCTGA CTGCGGTTGC GATTACGTTA GCTCCCGGTC TCATCACTCA GTTTGCGGTC
CTTCTGATCG CCGCTTTCGT TGGCCAAGCC CGCTTGGCAC CACAACAGTC ATTTTCGACA
ACCACGTTCA GCCCCTCTTG GCTTTCACTG CTACTTTTTG CAAGTTTATT ACTCGGGCTG
CCGCTCTTGG CTGCAAGCTC ACCGCTGGTT GAGTTGTTTG GCCATTTCTT CCAAGCAGGA
AGCTTAGTGT TTGGTGGCGG TCATGTGGTT CTTCCCTTGC TGCAAAATGC CTTAGGTGAC
AGCCTATCGA CCGATCAATT TCTGACAGGC TACGCGGCAG CACAAGCGGT GCCGGGCCCA
ATGTTTACCT TAGCCACTTA CCTTGGCTAT GTGCTGACAC CAGAGATGCC CGTGGTTGGC
GCTTTAATCG CAACCTTAGC CGTGTTTCTC CCCGGTTTTT TATTGCTACT CGGCGTACTC
AAAAACTGGT CGGCATTGGC TCAGCGCCCG AAAGTTGCAG GAGCCATGCA AGGAGTAAAC
GCCTGTGTGG TCGGTTTACT GCTCGCCGCC TTATATCAAC CCGTTTGGAG TAGCACAGTA
CATGCCCCAC TCGATTGGGC AGCCCTGTTA GTCGGCTTCT TCTTGTTTAA AGTCTTGCGA
CTTCCTTTAA TTGGCATGGT GGGGAGCACC TTGTTATTTG GTGTGCTCAG CGGCTTAATC
TAA
|
|---|
| Protein sequence | MLTIFRTFFA LGWVSFGGPA AHIGYFRHTF VEKLRWVSEQ EYAQFVALSQ FLPGPGSSQV
GFAIGYHRGG LAGAWAAFLG FTLPSVLIML LLAGLSSHLL DTPLFEQMIH GLKLLAIIVV
ADACLTMYRN FCQQRLTAGL CVLTAVAITL APGLITQFAV LLIAAFVGQA RLAPQQSFST
TTFSPSWLSL LLFASLLLGL PLLAASSPLV ELFGHFFQAG SLVFGGGHVV LPLLQNALGD
SLSTDQFLTG YAAAQAVPGP MFTLATYLGY VLTPEMPVVG ALIATLAVFL PGFLLLLGVL
KNWSALAQRP KVAGAMQGVN ACVVGLLLAA LYQPVWSSTV HAPLDWAALL VGFFLFKVLR
LPLIGMVGST LLFGVLSGLI
|
|---|
| |