Gene VC0395_A1914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1914 
Symbol 
ID5136778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2039210 
End bp2039554 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content50% 
IMG OID640533372 
Producthypothetical protein 
Protein accessionYP_001217839 
Protein GI147674584 
COG category[R] General function prediction only 
COG ID[COG0073] EMAP domain 
TIGRFAM ID[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTCGG CGTTTTTGAC GGTAGGGTAC GATGATTTTG CGCGGCTGGA TTTACGTATT 
GGCACCATTG TTGAGGCAAA GCTTCATCCT CGTTCGACCC GCAACTATAT TGTGCAGATT
GCGTTGGGAG AGCAGATGTT GCAAGCCGTC ACCGCGTTAG CACCTTATTA CTCGGCAGAA
CAATTACTCA ATCAACAAGT GGTGGTGCTG TGCAATCTCA AACCGAGCTT GGTAGCTGGT
GTAGAATCCC ACTGCATGCT GCTGTGCGCG GAAACGCAAG ATGGAGAAGA GAGTGTATTG
CTCACCCCAC AACGGATTAT CGCCAATGGG GTGAGAATCG TTTAG
 
Protein sequence
MDSAFLTVGY DDFARLDLRI GTIVEAKLHP RSTRNYIVQI ALGEQMLQAV TALAPYYSAE 
QLLNQQVVVL CNLKPSLVAG VESHCMLLCA ETQDGEESVL LTPQRIIANG VRIV