Gene VC0395_A1911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1911 
Symbol 
ID5135990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2034722 
End bp2035813 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content49% 
IMG OID640533368 
Productacetyltransferase 
Protein accessionYP_001217835 
Protein GI147675158 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATTC GTCGTGCCAA TAGCGCTGAT CTCAATGCGC TCAATGCGTT AGAACAACAG 
CTTTTTGACG GGGATAGAAT CTCTCCTCGC CAAATGAAGC GTTTTTTACA TTCCGACCAT
GCGGCGTTAT TCGTGGCAGA TGCCGGCGAC CAGCTGGCGG GATATGCATT GCTTCTATTT
CATCAAGGTA CACAGCTATC AAGATTGTAT TCGATTGCCG TAAAACCTGA ATTCAGAGGG
CAGAGAATTG CTCAGAGTTT AGTCGAGCAA TGCGAGCGTG CTGCTCTTGA TCAAGGCTCA
ACTACATTAC GGCTGGAAGT GCGTGAAGAC AATACCGCCG CCCTAAAATT ATATGAAAAG
ATGGGCTATA AAACCTTGAA GTTGCTCATC CATTACTATG ACGATTTGTG CGATGGGCGC
AGAATGCAGA AAAGGTTAAC GCCTCAAGAG TCCAAAGTCT TGCTGCCGAT GCCTTTGTAT
GTACAAACCA CGCCATTTAC TTGTGGTGCA GCCTGTCTGT TAATGAGTTT TGCCTGCTTG
GATAAAACCT TTGAGCCGAG CCGCACGCAA GAGATGCAGC TGTGGCGTGA AGCCACCACG
ATTTTTATGG CGGCTGGGCA TGGTGGCTGC AGTGGCCAAG GTTTGGCGCT GGCCGCCGCA
AGACGTGGCT ATCATGTTGA GCTATGGAAT CAATCTCGAT CAACGCCTTT TATTGATAGC
GTACGTGACC CCAACAAAAA GCAGATCATT GAGTTAGTGC ACCAAGATTT TTGCCAGCAA
CTTACCGAGC AAGATGTGAG TATGATTGAT GCGCCGCCAT CGCAAGCCCA GCTTGAAGAG
TGGGTACGGC AAGGAGCCTG TGTGCTGCTG CTCATTAGCA CGTACCGTTT TGATGGTAAG
AAAGAGCCGC ACTGGATTGT GCTCAGTGGC TTGAGTGATA AGTTCTTCTT TTTCCACGAT
CCGCATGCAG AATCGGAAGA GCATGTGAGC GGTTCGGGTT ATATTCCGGT GGGCAAAGCG
GCACTGTCGC AAATCATCGG CTTTGGTAAG CAAAAGCAGA TCGCTTGTGT GGTGATCACA
CCTCGCCTAT AG
 
Protein sequence
MDIRRANSAD LNALNALEQQ LFDGDRISPR QMKRFLHSDH AALFVADAGD QLAGYALLLF 
HQGTQLSRLY SIAVKPEFRG QRIAQSLVEQ CERAALDQGS TTLRLEVRED NTAALKLYEK
MGYKTLKLLI HYYDDLCDGR RMQKRLTPQE SKVLLPMPLY VQTTPFTCGA ACLLMSFACL
DKTFEPSRTQ EMQLWREATT IFMAAGHGGC SGQGLALAAA RRGYHVELWN QSRSTPFIDS
VRDPNKKQII ELVHQDFCQQ LTEQDVSMID APPSQAQLEE WVRQGACVLL LISTYRFDGK
KEPHWIVLSG LSDKFFFFHD PHAESEEHVS GSGYIPVGKA ALSQIIGFGK QKQIACVVIT
PRL