Gene VC0395_A1910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1910 
Symbol 
ID5137485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2033375 
End bp2034619 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content52% 
IMG OID640533367 
Producthypothetical protein 
Protein accessionYP_001217834 
Protein GI147673068 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3213] Uncharacterized protein involved in response to NO 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTTGGT TTGTGCTCAT CACTGGTTCG GTCTGTGATG AAGTCGGCGA AGGAGCCAAA 
GTGATCAACA TTATCGATAA ACGTGTCGAA GAGCGTATTC CTGCCGTACT GCGGTTGGGA
TTTCGTCCTT TCTTCTTACT TGGCAGTGTT TATGCCGTGG TGGCGATTGT GGCTTGGGTG
TGGATGTTTC AAACCGGACA ACCGCCACGC TTGCAAGTCC CCGCGCTGTG GTGGCATGTG
CATGAAATGC TGTTTGGTTT TGCGATGGCG ATTGTGGCCG GATTTCTGCT CACGGCGGTG
CAAAACTGGA CGGGCATTAC TGGCACGAAA AGTCACCGTT TAGCTCTCAT TGTGGCTTTG
TGGCTAATGG TGCGGATTCT GTTTTGGTTA CCTGTGCCGC TCTGGTTAAC GTCGAGTATT
GAAGCGCTAT TTCTTCTGGC GGTGGCCTAT GAAGTGGGGT TACGGGTGGT AAAAGCCAAA
GGTTGGCGCA ACCTATTTTT TATCCCTCTG TTTCTGTTGG CGATTGCCGC TAACTTTGCC
AGCTACGCCA CCATTAAAGG CATGCCGCCA TTCCCGAGCA GTGCGGTGTG GCAAGCCATG
CTGTGGTGGT TTATGTTGCT GCTTTCGGTG ATGGGCGGGC GAGTGATTCC GTTTTTTACT
GCAAGACGCT TTCAATTTAC CAAAGCGGAG CCGATTTTGG CTTTGGATGT GATCGCAAAC
GGTAGCTTAC TGGCGCTGTT TGTACTTAGT TTCTTCCCAT TGACCACGGC ACAACTCGGC
CAGCCTTTGA TGCTGTTAGC TGGCGTCGCG CAATTGATCC GCTTTTTACG TTGGCAGTCT
TGGCGTACAG TGAGTGAGCC TTTAGTCTGG TCACTGCATG CTGCCTATCT GTGTATCCCG
CTGAGTTTGC TGCTGCGCGG GGGAGTGAAT AACGCTTGGC TGAACCACAA CTTACTGCAT
TTATTTGCGA TTGGTGCGCT CTCTGGCCTA GTTTTAAGCA TGATTGCGCG TGTCACTATG
GGGCATACGG GACGAGCGAT TTATCAAGGC CCTAACATGC AATGGGCATT TATCGCTTTG
TTGCTTGCTG CACTTGTGCG CAGTTTCGGT GTGGGTTTGC TGCCGCAGCA GTTGCTGATT
TGGGTGAACC TGAGCGCTGC GCTGTGGGTG ATTGCGTTTG CACTGTTTGT GCTGCGCTTT
GGCGCAATGT TGCTAAAACC AAGAGTGGAT GGTCATCCCG GTTAA
 
Protein sequence
MAWFVLITGS VCDEVGEGAK VINIIDKRVE ERIPAVLRLG FRPFFLLGSV YAVVAIVAWV 
WMFQTGQPPR LQVPALWWHV HEMLFGFAMA IVAGFLLTAV QNWTGITGTK SHRLALIVAL
WLMVRILFWL PVPLWLTSSI EALFLLAVAY EVGLRVVKAK GWRNLFFIPL FLLAIAANFA
SYATIKGMPP FPSSAVWQAM LWWFMLLLSV MGGRVIPFFT ARRFQFTKAE PILALDVIAN
GSLLALFVLS FFPLTTAQLG QPLMLLAGVA QLIRFLRWQS WRTVSEPLVW SLHAAYLCIP
LSLLLRGGVN NAWLNHNLLH LFAIGALSGL VLSMIARVTM GHTGRAIYQG PNMQWAFIAL
LLAALVRSFG VGLLPQQLLI WVNLSAALWV IAFALFVLRF GAMLLKPRVD GHPG