| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1905 |
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| Symbol | recC |
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| ID | 5135824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2025868 |
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| End bp | 2029314 |
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| Gene Length | 3447 bp |
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| Protein Length | 1148 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640533362 |
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| Product | exonuclease V subunit gamma |
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| Protein accession | YP_001217829 |
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| Protein GI | 147673707 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1330] Exonuclease V gamma subunit |
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| TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTACGG TCTACCACTC CAACCAAGTT GAAACGCTGA AGATCCTGTT GGTGCATTTA
ATCAAAAATG AACCGTTGGA CGATCCCTTT ATTCCTGAGA GCATTTTGGT GCAAAGCCCC
GGCATGTCGC AGTGGCTGAA AATGGCGCTG GCTAGCGAAT TAGGGGTTGC CGCGAATCTT
GAGTTTCCTC TACCGGCAAC CTTTATCTGG CAGATGTTTA CTCAAGTGTT GCCCGATGTG
CCGCAGCGCA GCGCCTTCAA TAAAGAAGCC ATGAGTTGGC GTTTGATGGA GCTACTGCCC
AAGCTGCTTG ACCGAGCCGA ATTCCAACCG CTGCAACGCT ATTTACAAGA CGATGAAGAT
GATTCTAAGC GCTTCCAATT AGCGGAAAAA ATTGCCGATA TTTTTGATGG TTACTTGGTG
TATCGCCCCG ACTGGATTTT AAGTTGGGAA GCGGGGGAAG AGGTGGCGGA AATCGCTGAC
CAACACCCGT GGCAGCCGAT TTTGTGGCGT GAACTCTACG CTTACACGCA TAAGCAAGGG
CACTCGATTT ATCACCGTGC TAACCTCTAT CAGCGTTTTA TTGAACAGTT GGCGAGTGGC
GATTTTGATC GCAGCACATG GCCTAAGCGG TTGTTCATCT TCGGTATTTC TGCGCTGCCG
CCCCGTTATA TTGATGCGCT GCGCGCGATG GGGGAGCATA TCGACGTGCA CCTGATGCTG
ACCAACCCTT GTCAGCACTA TTGGGGCGAC ATTCGTGACC GTAAATATCT GGCGCGAGTG
GCAGCGCAAA AACGCAAGCT CCTGCACATT AACGGTGAGC AAGTCACTGT TGGCAGTGAA
GTCTCGCCGC TCAAAGGCGA TGTGGAAAAC TATCTGCAAG AGTCGATGCA CCTGAGTCAC
GCGGTGGGCA ATAGCTTACT GGCCTCGATG GGCAAAATGG GGCGCGATAA TCTCTATCTT
CTGGCACAAA ACGATCAGTC TGAATTAGAG CTGTTTATTG AGATTCAACG CGACTCGCTG
CTGCATCACA TCCAAGCAGA TATTTTGCAT CTGCAAGAGC ATCAAGACGA TGCCAAGTTT
GCCAGCAGCG GTCATAAACC CAGCATTGCC GCGCAGGATG ATTCCCTGCA GATTGCCCTA
TGTCACAGCC CAATTCGTGA AGTGGAAGTG CTGCACGACC GACTGCTGGC CGAGTTTGAG
CGTGACCCTA GCCTGAAACC GCGCGATGTG ATTGTGATGG TGCCTGACAT TAACGCCTAC
GCGCCTTACA TTCAGGCGGT GTTTGGCAAC GCGCCCGGCG AGCGTTTTAT TCCGTTTTCA
ATTTCCGATC GCAGCGCCGA TCAGGAAAGC CCTATCTTAA CCGCCTTCTT GCAGTTGTTA
GCGCTGCCGC AATCACGCTG TCTGGCTTCT GAACTGCTTG AGCTACTTGA AACCCCGGCG
ATTATGGCGC GTTTTGCGAT TGACGAAGAA GAGTTTGCCA CTGCCAAACG TTGGGTCGAA
GAAGCGGGCA TTCGTTGGGG GCTGAATAGC GACACGGGTG CGGAGTTTGA ACTGCCCGCC
AGTGAACAAA ATACGTGGCA GTTTGGCATT GAACGTATGT TACTGGGTTA CGCCATGCCG
GCTGAAGCGG GATTGTATGA ACTTGGCGGC CAGTGGCTTG CTCCTTATAA CCAAGTCCAA
GGTATGAGCG CTGAGTTGGC GGGTAAGCTC GCACACTTTG TGGAAACGCT CAGCGATCTG
CGTAGCCAAC TGGCGCAAAC CCAAAGCATG GAACAGTGGC GTTATTGGCT CAACGAGCTG
TTGGAGCGCT GTTTTAGTGT CGATCTGCAA GGTGAGCTGG CGCTGAAAAC CATCCGCGAT
AGTTTGGTGA ACCTAAAACA GCAGTTGGCC GACGCGGGCT ACCAACAAGC GATTTCACCG
GCCATTATTC GCCAAGTGCT GACCAATAAA CTCTCCGGAA CTCGGATTAG CCAACGCTTT
TTAGCGGGAC AAGTGAACTT CTGTACCCTG ATGCCGATGC GTTCGATCCC GTTTCGCCGA
GTGTGCCTGC TTGGCATGAA TGATGGGGTT TATCCACCCA ATGAAATGGT GGAGGGGTTT
GACCTGCGCA ATGTGCAGCG CCGAGTCGGC GACCGTTCAC GGCGTGAAGA ATCACGCTAC
CTATTTCTCG AAGCCTTGTT GTCAGCCAAA GAACAGCTTT ATATCAGCTA TGTCGGCCGC
TCGATTCAAG ATAACAGCGA GCGCGTGCCT TCAGTGCTGG TCAGCGAGCT TTTGGAATAT
TGCGAGCAGA ACTACTGCTT GGCAGGCGAT GAAAATCTAG AAAGTGATGA CTCAGGACGC
CGTTTGGTTG AGCACTTAAC CACTCAGTAT CCTATGGTGC CGTTCAGCCC GCAGGCGTTT
ATCGCTGGCA GTTTTGCCCG TGAATGGCTG CCTGCAGCGC GTCGCCAAGG GCAGAGCAGC
GCAGATTTTC TCACCCCACT CAGTGATTAT CTGCTCGAAG TGAGTTGGCC GATGGAGCTG
GATCTGGTTG AGCTGCAACG TTTTTGGCGT CTGCCGGTGG CGTATTTTTT CAAACGCCGC
TTGAAAGTGA GCTTTGAGCC GCCGCTGGCT GTGCTGGAAG ATGATGAGCC GTTTGCTTTG
GATGGATTGA GCGCGTATCA GTTGCGTGAT GAGTTAGTGG AAAATCTGCT GGCTTGCTGT
GATGGCGCAG AGCGCGACCA AGTGGTGGCG CAGTTTGCTA AGCAGCAACG AGCGCAAGGC
AAGTTGCCGG TGGCGGCGTT TGGCGATCTT GAATTGGCGC AAAGTGCGCA GCAAGCTTTG
GCGCTGGCGG AAAAAATTGG CTTTTTGTGT CACCAACCAC TGGAAGATGA AGAGATTGAT
CTACGCTTGC AGCCCTTTGA CGATGGCCGA GAAGTCTTAC TACGTGGTTG GCTCGTGAAG
CGTTATCAAT CTGGCTTGGT GCGCGCACGC AGTGGCGCGA TTCGCTCGGA AGATTTATTA
GCCGCATGGA TTGATCATCT TTGCTTGGCG GTGAGCGGCA AAGCCGTCAC GACCCATTTG
ATTGGTTATG AGCGCAAAGA AGGAGTGCAG CACCAAATGC TGCCGCCACT TAATGACGCG
CAGCAAGCCA AGGCGCTACT GAGTGAACTG GTGGCGCTGT TTTGCCAAGG CATGAACCAG
CCTTTGGCTT ATTTCCCGAA AACGGCGTTG GCTTGCGTTG AGGCGGGATT TTCCCGTGGC
AAATGGCAGG AAGATGAAGA GAAGTCCTAC AAGAAAATGG CGGACACCTT CAACGATAGC
TTTTACATCA AGGGTGAAGG CGGTAATCGC TACATCGCGC GTATTTGGCC GCAGTGGAGT
AATGAACTGG CAAAATCGCT GCGCCAATTG GCCATCACAG TGCTGCAAAC ACCGCGTTTA
CAAGTGCAAG ATGCCAAACA GGTTTAA
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| Protein sequence | MFTVYHSNQV ETLKILLVHL IKNEPLDDPF IPESILVQSP GMSQWLKMAL ASELGVAANL
EFPLPATFIW QMFTQVLPDV PQRSAFNKEA MSWRLMELLP KLLDRAEFQP LQRYLQDDED
DSKRFQLAEK IADIFDGYLV YRPDWILSWE AGEEVAEIAD QHPWQPILWR ELYAYTHKQG
HSIYHRANLY QRFIEQLASG DFDRSTWPKR LFIFGISALP PRYIDALRAM GEHIDVHLML
TNPCQHYWGD IRDRKYLARV AAQKRKLLHI NGEQVTVGSE VSPLKGDVEN YLQESMHLSH
AVGNSLLASM GKMGRDNLYL LAQNDQSELE LFIEIQRDSL LHHIQADILH LQEHQDDAKF
ASSGHKPSIA AQDDSLQIAL CHSPIREVEV LHDRLLAEFE RDPSLKPRDV IVMVPDINAY
APYIQAVFGN APGERFIPFS ISDRSADQES PILTAFLQLL ALPQSRCLAS ELLELLETPA
IMARFAIDEE EFATAKRWVE EAGIRWGLNS DTGAEFELPA SEQNTWQFGI ERMLLGYAMP
AEAGLYELGG QWLAPYNQVQ GMSAELAGKL AHFVETLSDL RSQLAQTQSM EQWRYWLNEL
LERCFSVDLQ GELALKTIRD SLVNLKQQLA DAGYQQAISP AIIRQVLTNK LSGTRISQRF
LAGQVNFCTL MPMRSIPFRR VCLLGMNDGV YPPNEMVEGF DLRNVQRRVG DRSRREESRY
LFLEALLSAK EQLYISYVGR SIQDNSERVP SVLVSELLEY CEQNYCLAGD ENLESDDSGR
RLVEHLTTQY PMVPFSPQAF IAGSFAREWL PAARRQGQSS ADFLTPLSDY LLEVSWPMEL
DLVELQRFWR LPVAYFFKRR LKVSFEPPLA VLEDDEPFAL DGLSAYQLRD ELVENLLACC
DGAERDQVVA QFAKQQRAQG KLPVAAFGDL ELAQSAQQAL ALAEKIGFLC HQPLEDEEID
LRLQPFDDGR EVLLRGWLVK RYQSGLVRAR SGAIRSEDLL AAWIDHLCLA VSGKAVTTHL
IGYERKEGVQ HQMLPPLNDA QQAKALLSEL VALFCQGMNQ PLAYFPKTAL ACVEAGFSRG
KWQEDEEKSY KKMADTFNDS FYIKGEGGNR YIARIWPQWS NELAKSLRQL AITVLQTPRL
QVQDAKQV
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