| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1903 |
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| Symbol | recD |
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| ID | 5137755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2019860 |
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| End bp | 2021980 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640533360 |
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| Product | exodeoxyribonuclease V, 67 kDa subunit |
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| Protein accession | YP_001217827 |
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| Protein GI | 147674978 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTTTT GGGATAGTGA AGTAGCGAAA CGTCTGCTGG CACAAGGCGC GCTGCGTCCT
TTGGATGTGC AGTTTGCCCG CTTTATTGGC AAGCAAGCCG CATTGGCAGG GCACAACGCT
GCAGAAAGTG AACTGTTGAG TGTGCTGAGC GCGGCGCTCA GTGCAGAACT TGGGCGTGGA
CACATCTGTT TGCCACTGTG GGATGCACAG GGTAATCGCT GCGATCTGGC GGCGCTGATT
GGTCTTTATG GTGAAGCGAG TTTGCAGCAC AGTGAACGCT GGTTAGCGTT AGACTGGCAA
GCCTTACTGC AAGCCTCGCC GTTGGTGGGG AAGCAAGGTG AAGCGGTGCC GTTAATGTTT
GATGGCGCAA GGCTCTATCT GCATCGCTAC TGGCATTATG AAAAGCAACT GGCAGCGCGA
TTGACTGAGT TGGCCGCACC CCAACGTTTA AGCCCTGCTG AACTGGCTAA CTTGCGTGAA
CGCCTGAATA CCTTATTTGC CCGCGACTAT TTAGGCTTGT GGCAAGCACT ACAACAAAAG
CCGCTGAGTT CGGTCGAGCG GATTCAACTG CTGAATGATC GATTGGATGT GGTGGAGTCG
GATGCGCTGG ATTGGCCAGC GATTGAAGCT GTAGTCGAAA AAGCGCAGCG TGCCGCGGAT
TTGCAAGCTT TAGAGCAGCT TATTCCGCTT ACTCACTGCT TAAACTGGCA AAAAGTGGCG
GCTGCCGTCG CGCTCACGCG CCGTTTTGCG GTGATTTCCG GTGGGCCGGG AACCGGCAAA
ACCACCACAG TGACCAAGCT TCTGGCGGCG CTGATTAGCC AAAGCATGGC GCAAGGTAAA
GTGCCAGAGA TCAAATTGAT TGCTCCAACC GGTAAAGCCG CGGCACGCTT AACCGAATCG
ATGGGTAAAG CGGTGAGTCA GCTGGCGATA GAGCCTGAGA TCGCCGCGGC GATCCCAAGC
ACTTCCAGTA CCATTCACCG TTTGCTTGGC GCGATTCCGG GCAGCGCTGA GTTTCGTCAT
CATGCACGTA ATCCACTCCA TCTTGATCTG TTGGTGGTGG ATGAAGCGTC CATGGTCGAT
CTGCCTTTGA TGGTGAAACT GGTCGAAGCG CTGCCCAAGC ACGCTCGGTT GATTTTACTT
GGCGATAAAG ATCAGTTGGC CTCGGTAGAA GCGGGGGCGG TGCTCGGTGA TATTTGTACC
TTCCTGAACC AAGGTTACGG TAATGAGCAG GGCGCGCAGT TGGCTGAACT GACGGGGTTT
GCCTCTTTGC GCCAAACTGC CAGTAAGACG GTGAATCCGG TGGCGGATTG CTTATGCATG
CTGCAAAAAA GCTACCGTTT TGATGCACGT TCTGGCATTG GCCAACTGGC GAAAGCGATC
AACAGTGGAT CTCCGGCGCG CGTTGAAACT GTGTGGCAGC AATCGTTCAG CGATATTGAA
CATTTTGCCC TTAGTGGCGA GCATTATCAG CAACTGCTGC AAACCTTAGT GCAGGCTTAT
CGTCCTTATC TGAATTTGCT CAATCAATCG ACTGAGCAGT TTGAGTCGAC AAAGCAAACC
ATGCTCACAC TAGCCAAATC AGCACTCGAT GCGTTTAGTC GCTGCCGATT ATTGTGCGCG
TTACGTGAAG GCGATTTTGG GGTGATGGGG CTGAACACTC GCATCGAACG GGCGTTGAAT
GCGCACAAGC TGATTAAAAC TCAAGAAGAG ATCTGGTATC ACGGGCGACC GATCATGGTC
ACGCGTAACG ATCATGGCTT GGGGCTATAC AATGGTGATA TCGGTTTGTG TATGCGCGAT
CGTGACGATG ATCAGGGCAG ACTGAAAGTC TATTTTGAGC TGCCGGATGG CAGCATTAAA
GCCGTGTTAC CGAGCCGAGT CCCGCAACAT GAAACCGCGT ATGCGATGAC CATACATAAA
TCGCAAGGCA GCGAATTTGA TTTAACTTTG CTGATTTTAC CGCCGGATTA CAGTCCGATT
CTGACGCGTG AGTTAGTTTA CACGGGGATC ACAAGGGCGA AAAAACAGCT CAAATTGTAT
TGCGATAACA AGGTATTGCA GCGGGCAATT AAAGTGAAAA CCCAACGGGC GAGTGGCTTA
GTGGCAAGGT TGGAGCAGTA A
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| Protein sequence | MMFWDSEVAK RLLAQGALRP LDVQFARFIG KQAALAGHNA AESELLSVLS AALSAELGRG
HICLPLWDAQ GNRCDLAALI GLYGEASLQH SERWLALDWQ ALLQASPLVG KQGEAVPLMF
DGARLYLHRY WHYEKQLAAR LTELAAPQRL SPAELANLRE RLNTLFARDY LGLWQALQQK
PLSSVERIQL LNDRLDVVES DALDWPAIEA VVEKAQRAAD LQALEQLIPL THCLNWQKVA
AAVALTRRFA VISGGPGTGK TTTVTKLLAA LISQSMAQGK VPEIKLIAPT GKAAARLTES
MGKAVSQLAI EPEIAAAIPS TSSTIHRLLG AIPGSAEFRH HARNPLHLDL LVVDEASMVD
LPLMVKLVEA LPKHARLILL GDKDQLASVE AGAVLGDICT FLNQGYGNEQ GAQLAELTGF
ASLRQTASKT VNPVADCLCM LQKSYRFDAR SGIGQLAKAI NSGSPARVET VWQQSFSDIE
HFALSGEHYQ QLLQTLVQAY RPYLNLLNQS TEQFESTKQT MLTLAKSALD AFSRCRLLCA
LREGDFGVMG LNTRIERALN AHKLIKTQEE IWYHGRPIMV TRNDHGLGLY NGDIGLCMRD
RDDDQGRLKV YFELPDGSIK AVLPSRVPQH ETAYAMTIHK SQGSEFDLTL LILPPDYSPI
LTRELVYTGI TRAKKQLKLY CDNKVLQRAI KVKTQRASGL VARLEQ
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