Gene VC0395_A1899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1899 
SymbolmltA 
ID5136567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2016229 
End bp2017335 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content50% 
IMG OID640533356 
Productmurein transglycosylase A 
Protein accessionYP_001217823 
Protein GI147673142 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2821] Membrane-bound lytic murein transglycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTAAAC GTCTTCTTTC TCTCGCCAGT TTGGCACTGC TGTTTGGTTG TGCTCAGCAA 
CCTAACGATC GTGCTCAGCA ATACCAACAA CAAACTTTTC CACACATTTT GAATCGTGCC
GATGTGGTTG AATCCAATAA GCCGCGTGAC TATACCGAAT TCAGTAAACA GAGTGAGTTG
GTCGTGCAAG GCTCAGCCTC CATGGCCAAG ATCTATCGAC CGCTGTATGA ACAATTGAAT
GAGTGGGTTC TGCAAAGCGG AGATCCTGCC ACTTTAGCGC AATTTGGTAT TCAAGCAGCG
CAGTTAGGTG GCGGGGATAA ACAAGGTAAC GTATTGTTTA CTGGCTATTT TTCACCTGTG
ATTGAGCTGC GTCATCAACC CGACAGCGTG TTTAAATATC CGGTTTACGG CTTGCCAAAA
TGCAACAAAA ACTGCCCCAC TCGAGCGGAG ATTTACCAAG GTGCGCTGGA TGGTCAAGGT
TTAGAATTGG GCTATGCGGA GAACTTGATC GATCCTTTCA TCATGGAAGT GCAGGGCAGT
GGCTTTGTTC ACTTTGGGGA TGACGATACT TTGGAATACT TCGCTTACGC GGGTAAAAAT
AACAAGGCTT ACGTCAGCAT TGGTAAAGTG TTGATTGAAC GCGGTTTGGT TGAGCGCGAG
AAAATGTCGC TCAAAGCGAT CAAAGATTGG GTGCTGGCCA ACGATGAAGC CACCGTACGT
GAACTGCTTG AGGAAAACCC TTCCTTCGTA TTTTTCAAAC CCAGCGCCGC GGCACCTGTG
AAGGGCAGCG CCGGGATTCC TTTATTGCCG ATGGCATCGG TTGCCGGGGA CCGTTCAATT
TTGCCTATGG GGACGCCAAT TCTAGCGGAA GTCCCCCTGC TGAATGCCGA TGGCACTTGG
TCTGGCGCAC ATCAACTGCG TTTGTTGATT GTGCTTGATA CAGGCGGTGC CGTGAAACAA
AACCATCTCG ACTTGTACCA CGGTATGGGA CCACGTGCAG GGTTAGAAGC GGGGCACTAT
AAGCACTTTG GCCGTGTGTG GAAACTCGGG TTAGAAAACT CGCCTACCCA AGCACCATGG
GCATTGCCGC CGGAAAAACA GCAATAG
 
Protein sequence
MSKRLLSLAS LALLFGCAQQ PNDRAQQYQQ QTFPHILNRA DVVESNKPRD YTEFSKQSEL 
VVQGSASMAK IYRPLYEQLN EWVLQSGDPA TLAQFGIQAA QLGGGDKQGN VLFTGYFSPV
IELRHQPDSV FKYPVYGLPK CNKNCPTRAE IYQGALDGQG LELGYAENLI DPFIMEVQGS
GFVHFGDDDT LEYFAYAGKN NKAYVSIGKV LIERGLVERE KMSLKAIKDW VLANDEATVR
ELLEENPSFV FFKPSAAAPV KGSAGIPLLP MASVAGDRSI LPMGTPILAE VPLLNADGTW
SGAHQLRLLI VLDTGGAVKQ NHLDLYHGMG PRAGLEAGHY KHFGRVWKLG LENSPTQAPW
ALPPEKQQ