| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1888 |
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| Symbol | ppiA |
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| ID | 5136667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2006788 |
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| End bp | 2007372 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640533345 |
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| Product | peptidyl-prolyl cis-trans isomerase A |
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| Protein accession | YP_001217812 |
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| Protein GI | 147673347 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAGCT GCAAAACTAC ATGCAGGAGC GCTTTAATGG CTAAGTCATG GCTATTGGCA
ACCGTAGCAC TGGTCAGCAG TTGCGTGTGG GCGGGTCCCA AAGTCGCAGT GGAAACCACA
CTCGGCAATT TCACGATCGA GCTGAATCAA GAAAAAGCAC CGATCTCGGT TGCGAATTTC
TTACGCTATG TGGATGACGG CAGCTATGTT GGCAGCCAAT TTCATCGCGT GATCCCAGGC
TTTATGGCGC AAGGAGGTGG CTTTGATGCT TATCTTAATC AGCTACCGAC TTACGCCCCG
ATCGAGAATG AAGCCAGCAA TGGCTTGCGT AATGATACCG CGACCATTGC CATGGCTCGT
ACGCAAAACC CGAATTCGGC AACAAGACAG TTTTACATTA ACTTGGTGGA TAATGATTTC
TTGAACTATG CCGCAAAGCC GCCGGGCTAT GCGGTGTTTG GTCAAGTGAT CGAAGGGTTT
GATGTGATTG AAAAAATGGC TCAGCAACCG ACTCAAAATA AAGGTCGAAT GCAGAACGTT
CCTGTCACAC CCATCGTCAT TAATAAAGTC ACTCGCTTAC CTTAA
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| Protein sequence | MPSCKTTCRS ALMAKSWLLA TVALVSSCVW AGPKVAVETT LGNFTIELNQ EKAPISVANF
LRYVDDGSYV GSQFHRVIPG FMAQGGGFDA YLNQLPTYAP IENEASNGLR NDTATIAMAR
TQNPNSATRQ FYINLVDNDF LNYAAKPPGY AVFGQVIEGF DVIEKMAQQP TQNKGRMQNV
PVTPIVINKV TRLP
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