| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1886 |
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| Symbol | |
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| ID | 5135892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2004964 |
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| End bp | 2006214 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640533343 |
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| Product | hypothetical protein |
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| Protein accession | YP_001217810 |
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| Protein GI | 147675117 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.112919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGAATAG ACCATAGCGG GTCTTGCGTG TGGCTAAAAA TGCAAAAACC TAGGTTTTCA
TTTGCTGTTT TATTGCCATC TGAGACAATG CGCCGTCAAT TTACTAGAAA CACGAGCAAT
ATGAAAACTG AGCTTACTTT GCTTGAGCAG ACGCTCACTC TTCATCGTTT CCCAAAGCGC
AATAACGAAA CTTTGCAAGC TTGGGATGCC GGCGATGAGT ACCTCATCCA GCATGTGGAA
CAACTCGCCC TCCCAGAATC TAGCCATATA GTGATCATTA ATGACCATTT CGGCACTTTA
AGTTGTTGGT TTAGTCAAAA ACATAAAGTC AGCATGATGA GTGACTCCTA CATTGCCCAT
CAAGCGACTC AAGCGAATTT GCAGCAAAAT CAGCGTCCGC CAGTTCAGTT ACTGACGACG
TTGGATCCGG TCCCTAATGA TGCCTCTGTC GTGCTACTGC AACTGCCCAA GAGTAATCGT
CATCTGGTGT GGATCCTGAG CCAACTGCGT AAAGCCCTTT CGCCGAACAT CCCGATCATT
GCGGTGAATA AAGCGAAGGA GATTCATACA TCAACCTTGA ATCTGTTTGA AAAGCATCTA
GGCCCCACCA CCACTTCGCT GGCGTGGAAA AAACATCGTT TAGTGTTCAG TTCTGCGACG
GTGAATCCCG CTAATGAGGT TAACCCTGAA TGCGGTTGGA GCATTGAGCC TTATGCTATC
ACCCTCACTA ACTTACCGAA TGTGTATTCG GGTGAAAGTT TAGATCTGGG TTCCAGATTT
ATCCTTGAGC ATTTGCCAGC CGATCCGACT CTGGAAGACT TTATTGATCT TGGGTGTGGC
AATGGCGTGT TATCGGTTCG TCTCGGACAA TTAAACCCAC AAGCGAAGAT CACCTGTGTT
GATGAAAGCT TTATGGCGAT CGCCTCCGCA CAAAAAAACT TACACGACAA TCTCGGTAAA
CGAGATATTC ACTGTATCGC CAACAACTGT CTGGATGGTT TCCCAGCGCA CAGTAGTTCA
ATGATTGTGT GTAATCCGCC GTTCCATCAA CAACAAACCA TTACGGATCA CATCGCGTGG
CAAATGTTCT GTGACTCAAA GCATGTTCTG AAAAAAGGCG GGAAATTATG GGTGATCGGC
AATCGCCACC TCGGCTACGA TGTAAAACTG GCAAGATTGT TTGGTAAAAG TCATGTTAGA
GTGATCGCCA ACAACAGTAA ATTTGTTATC TTACAAGCTA TTAAATCTTG A
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| Protein sequence | MRIDHSGSCV WLKMQKPRFS FAVLLPSETM RRQFTRNTSN MKTELTLLEQ TLTLHRFPKR
NNETLQAWDA GDEYLIQHVE QLALPESSHI VIINDHFGTL SCWFSQKHKV SMMSDSYIAH
QATQANLQQN QRPPVQLLTT LDPVPNDASV VLLQLPKSNR HLVWILSQLR KALSPNIPII
AVNKAKEIHT STLNLFEKHL GPTTTSLAWK KHRLVFSSAT VNPANEVNPE CGWSIEPYAI
TLTNLPNVYS GESLDLGSRF ILEHLPADPT LEDFIDLGCG NGVLSVRLGQ LNPQAKITCV
DESFMAIASA QKNLHDNLGK RDIHCIANNC LDGFPAHSSS MIVCNPPFHQ QQTITDHIAW
QMFCDSKHVL KKGGKLWVIG NRHLGYDVKL ARLFGKSHVR VIANNSKFVI LQAIKS
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