Gene VC0395_A1884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1884 
SymbolnqrA 
ID5136504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp2002774 
End bp2004162 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content48% 
IMG OID640533341 
ProductNa(+)-translocating NADH-quinone reductase subunit A 
Protein accessionYP_001217808 
Protein GI147674300 
COG category[C] Energy production and conversion 
COG ID[COG1726] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA 
TIGRFAM ID[TIGR01936] NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000568593 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGCAATG AAAGAATCTT TTTCCCGATA AAAGTAGTGC AAGTGCGTAT GATTACAATA 
AAAAAGGGAT TGGACCTTCC TATCGCAGGA ACTCCTTCCC AGGTGATTAG TGATGGTAAA
GCCATCAAAA AAGTCGCCTT GCTTGGCGAA GAGTACGTTG GCATGCGTCC TACTATGCAT
GTCCGCGTAG GTGATGAAGT AAAAAAAGCT CAGATTCTTT TTGAAGATAA GAAGAATCCG
GGTGTGAAAT TTACTTCACC AGTCAGCGGT AAAGTGGTTG AAATCAATCG TGGTGCAAAG
CGCGTTCTTC AGTCTGTAGT GATTGAAGTG GCGGGTGATG ACCAAGTGAC CTTCGACAAG
TTTGAAGCCA ATCAATTAGC CAGTTTGAAT CGCGATGCGA TCAAAACTCA GCTGGTTGAG
TCTGGTCTTT GGACTGCTTT CCGTACTCGT CCGTTCAGCA AGGTTCCAGC CATTGATTCC
ACTTCTGAAG CCATTTTTGT CACTGCTATG GATACCAATC CGTTGGCAGC TGAGCCGACC
GTTGTGATCA ATGAACAATC TGAAGCCTTC GTTGCTGGTC TAGATGTGCT TTCCGCACTG
ACAACTGGCA AAGTGTACGT TTGTAAAAAA GGCACCAGCT TGCCACGTTC TCAACAGCCG
AATGTTGAAG AACATGTCTT TGACGGCCCA CATCCTGCAG GCTTAGCTGG CACTCACATG
CATTTCCTCT ATCCAGTAAG TGCAGACCAC GTGGCGTGGA GCATCAACTA TCAGGACGTG
ATCGCAGTAG GTCAACTGTT CCTGACGGGC GAGCTATACA CCCAGCGTGT GGTTTCTCTT
GCCGGCCCGG TGGTGAACAA ACCTCGTTTG GTTCGCACTG TCATGGGCGC ATCACTAGAG
CAACTGGTGG ACAGCGAAAT CATGCCTGGC GAAGTACGCA TCATCTCTGG CTCTGTGCTG
TCTGGTACGA AAGCCACTGG ACCACACGCT TATCTTGGTC GTTACCACCT ACAGGTCTCT
GTTCTTCGTG AAGGACGTGA TAAAGAACTG TTTGGTTGGG CGATGCCGGG TAAGAACAAG
TTCTCTGTGA CTCGCTCTTT CCTTGGTCAC CTATTCAAGG GCCAAGTGTA CAACATGACC
ACAACCACTA ATGGTAGTGA TCGATCTATG GTTCCAATCG GTAACTATGA GAAGGTCATG
CCACTAGATA TGGAGCCAAC CTTGTTGCTT CGTGATCTGT GTGCTGGTGA CAGTGACAGC
GCGGTTCGCT TAGGTGCTTT AGAGCTGGAT GAAGAAGATC TAGCACTGTG TACGTTCGTT
TGCCCAGGCA AATACGAGTA CGGTCAGCTC CTGCGTGAGT GCTTAGACAA GATCGAGAAA
GAAGGGTAA
 
Protein sequence
MRNERIFFPI KVVQVRMITI KKGLDLPIAG TPSQVISDGK AIKKVALLGE EYVGMRPTMH 
VRVGDEVKKA QILFEDKKNP GVKFTSPVSG KVVEINRGAK RVLQSVVIEV AGDDQVTFDK
FEANQLASLN RDAIKTQLVE SGLWTAFRTR PFSKVPAIDS TSEAIFVTAM DTNPLAAEPT
VVINEQSEAF VAGLDVLSAL TTGKVYVCKK GTSLPRSQQP NVEEHVFDGP HPAGLAGTHM
HFLYPVSADH VAWSINYQDV IAVGQLFLTG ELYTQRVVSL AGPVVNKPRL VRTVMGASLE
QLVDSEIMPG EVRIISGSVL SGTKATGPHA YLGRYHLQVS VLREGRDKEL FGWAMPGKNK
FSVTRSFLGH LFKGQVYNMT TTTNGSDRSM VPIGNYEKVM PLDMEPTLLL RDLCAGDSDS
AVRLGALELD EEDLALCTFV CPGKYEYGQL LRECLDKIEK EG