| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1879 |
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| Symbol | nqrF |
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| ID | 5136909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1998265 |
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| End bp | 1999491 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640533336 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit F |
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| Protein accession | YP_001217803 |
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| Protein GI | 147675137 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF |
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| TIGRFAM ID | [TIGR01941] NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.876962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTACTA TTATTTTTGG TGTAGTGATG TTTACCCTGA TTATACTGGC TTTGGTTCTG
GTGATTCTGT TCGCCAAATC CAAGCTAGTA CCAACAGGTG ACATTACAAT TTCTATTAAT
GGCGATCCTG AAAAAGCGAT CGTAACCCAA CCGGGTGGTA AGTTGCTGAC TGCACTGGCA
GGCGCTGGTG TATTCGTATC TTCAGCTTGT GGTGGTGGTG GTTCATGTGG CCAATGCCGT
GTAAAAATCA AATCAGGTGG CGGTGATATT CTGCCGACAG AACTGGATCA CATCAGCAAA
GGCGAAGCCC GTGAAGGTGA GCGTTTGGCG TGTCAGGTTG CTGTAAAAGC AGATATGGAT
CTGGAACTGC CAGAAGAGAT CTTTGGCGTG AAGAAGTGGG AATGTACGGT TATCTCTAAC
GATAACAAAG CCACTTTCAT CAAAGAGCTG AAGCTTGCGA TTCCTGATGG TGAATCAGTA
CCATTCCGTG CGGGTGGTTA CATTCAGATT GAAGCGCCTG CGCACCATGT TAAGTACGCC
GATTTTGATG TACCTGAGAA ATACCGTGGT GACTGGGACA AATTCAATCT GTTCCGTTAT
GAGTCTAAAG TGGATGAGCC AATCATCCGT GCATACTCAA TGGCGAACTA CCCTGAAGAG
TTTGGCATCA TCATGCTGAA CGTGCGTATC GCGACTCCGC CGCCAAATAA TCCAAATGTG
CCACCAGGCC AAATGTCTTC TTACATCTGG TCACTGAAAG CCGGTGATAA ATGTACGATT
TCTGGTCCGT TCGGTGAGTT CTTCGCGAAA GACACGGATG CAGAGATGGT ATTTATCGGT
GGTGGTGCGG GTATGGCGCC AATGCGTTCG CATATCTTTG ACCAACTGAA GCGTCTGAAG
TCTAAGCGTA AGATGTCTTA TTGGTACGGT GCGCGTTCTA AGCGTGAAAT GTTCTACGTG
GAAGATTTCG ATGGCCTAGC GGCTGAGAAT GACAACTTCG TATGGCACTG TGCTCTGTCA
GATCCTCAAC CAGAAGATAA CTGGACAGGC TACACCGGTT TCATCCATAA CGTACTGTAT
GAAAACTATC TGAAGGATCA CGAAGCTCCG GAAGATTGTG AATACTACAT GTGTGGACCT
CCGATGATGA ACGCGGCAGT GATCAACATG CTGAAAAACC TAGGTGTAGA AGAGGAAAAC
ATCCTACTGG ATGACTTCGG TGGTTAA
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| Protein sequence | MSTIIFGVVM FTLIILALVL VILFAKSKLV PTGDITISIN GDPEKAIVTQ PGGKLLTALA
GAGVFVSSAC GGGGSCGQCR VKIKSGGGDI LPTELDHISK GEAREGERLA CQVAVKADMD
LELPEEIFGV KKWECTVISN DNKATFIKEL KLAIPDGESV PFRAGGYIQI EAPAHHVKYA
DFDVPEKYRG DWDKFNLFRY ESKVDEPIIR AYSMANYPEE FGIIMLNVRI ATPPPNNPNV
PPGQMSSYIW SLKAGDKCTI SGPFGEFFAK DTDAEMVFIG GGAGMAPMRS HIFDQLKRLK
SKRKMSYWYG ARSKREMFYV EDFDGLAAEN DNFVWHCALS DPQPEDNWTG YTGFIHNVLY
ENYLKDHEAP EDCEYYMCGP PMMNAAVINM LKNLGVEEEN ILLDDFGG
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