| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1873 |
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| Symbol | |
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| ID | 5137451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1991565 |
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| End bp | 1992920 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640533330 |
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| Product | sodium-dependent transporter |
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| Protein accession | YP_001217797 |
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| Protein GI | 147673593 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACAAT CAAATTCTCG TGAGACATTC AGCTCTCGCC TCGGTTTTAT TCTTGCGGCT
GCTGGAGCTG CAGTCGGTTT AGGTAATATT TGGGGGTTTC CTACTCAAGC GGCCAGCAAT
GGTGGCGGCG CATTTTTGTT GGTCTACCTT ATTTTGATCT TTGTGGTCGC CTTCCCGATG
TTGGTCGTGG AAATGGCGAT TGGCCGCTAT GGTCAAGCTA ACCCTGTCGA TAGTATGCGT
TCACTCACCT CTCAACCTGC TGCGAAAAAA GTCGGTGGAT TCGTTGGTTG GGTTGGCCTT
AGTGTACCCA GTGCCGTCTT GGCCTTTTAC AGCATTGTGG GTGGCTGGAT TATCTGTTTT
TTACTGGGAG CCATGACCGA TCTGTTTGGT TTCACCGCGG CAAGTGCGTG GCTGAAAGGA
TTCAGTGTCG AACGTAATCT TTTTGGTACG CTGATTTTTT ATGTGTTAAC GATCTTGATT
GTGCAGGGTG GCGTGAAGCA GGGGATTGAG CGCTGGTCAA CCCGACTCAT GCCTGCTCTA
TTTGTGCTGT TTGCCGTGCT GTTTATCTAC ATCATGACTC AGCAAGGGGC TTGGGAAGGA
TTGAAGCATT ATCTGATCCC TGATTTTGAA AAAGTGTGGG ATCGTAAATT GATCTTGGCG
GCAATGGGAC AGGGATTCTT CTCATTAACC ATTGGGGGTT GTTCGATGCT GATTTACGGC
TCTTATCTGA GTAAGAAAGA GAACTTGCCG AAAATGGCGA TGAGCGTGAC CTTGGTGGAT
ACAGCGGTGG CTTTTATTGC TGGTTTGGTG GTGTTGCCAG CAATGTTTGT GGCAATGAAT
AAAGGCGTGC AGATTTATGC GCAAGATGGC TCTTTGCTGA GCTCTGATAC CTTAGTCTTT
ACCGTATTAC CTTTGATGTT TGATAGCTTG GGCTTACTGG GACAGATTTT CGCCATGGTG
TTTTTCCTTC TGCTCACCAT CGCTGCGCTC ACTTCTTCTA TCTCTATGCT TGAATGTCCG
GTTGCACTGG TGGGTGAGCG TTTCAATACT CGCCGTACGC CAACCAGCTG GGTGTTGGGC
GGTTTGATTG CCCTGTTCAG TGTGGTGATT GTCTATAACT TTGGTGCCCT GTTTGGTTTG
GTTGCCACTC TAGCGACGCA ATATTTGCAG CCTACTGCCG CCTTAATGTT CTGTCTCTTT
GGTGGTTGGG TATGGCAGCG TGATGCCAAA ATGAAAGAGC TGCAAGCCGG ATTTCCGGAA
CTGCAACAAA GCTTATTTGG CAAAATCTGG CCTTGGTATG TGAAATTTGT CTGCCCGGTT
TTAGTGGCGA CAGTGATTTG GGCTTCGTTT GGCTAA
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| Protein sequence | MAQSNSRETF SSRLGFILAA AGAAVGLGNI WGFPTQAASN GGGAFLLVYL ILIFVVAFPM
LVVEMAIGRY GQANPVDSMR SLTSQPAAKK VGGFVGWVGL SVPSAVLAFY SIVGGWIICF
LLGAMTDLFG FTAASAWLKG FSVERNLFGT LIFYVLTILI VQGGVKQGIE RWSTRLMPAL
FVLFAVLFIY IMTQQGAWEG LKHYLIPDFE KVWDRKLILA AMGQGFFSLT IGGCSMLIYG
SYLSKKENLP KMAMSVTLVD TAVAFIAGLV VLPAMFVAMN KGVQIYAQDG SLLSSDTLVF
TVLPLMFDSL GLLGQIFAMV FFLLLTIAAL TSSISMLECP VALVGERFNT RRTPTSWVLG
GLIALFSVVI VYNFGALFGL VATLATQYLQ PTAALMFCLF GGWVWQRDAK MKELQAGFPE
LQQSLFGKIW PWYVKFVCPV LVATVIWASF G
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