Gene VC0395_A1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1870 
Symbol 
ID5137803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1989103 
End bp1989546 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content46% 
IMG OID640533327 
Producthypothetical protein 
Protein accessionYP_001217794 
Protein GI147673192 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4067] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAA AAATGATTGT CGGATGGCGT GAGGAACTCA GCCTTCCAGG GTTAGGTATT 
GAACGTATTA AAGCGAAAAT CGATACCGGA GCCCGAACGT CTTGCTTGCA CGCGTTCAAA
GTGGAGAGCT TCACTAAGGA AGGAGCTCAA TGGGTTCGTT TTTGGATCCA CCCGATGCAA
AAGAATGATC AGCTAGTGAA TGTGTGTGAA GCCGAAGTGA TTGACGAACG TGTGGTTCGC
GATTCCGGTG GCCACGAAGA AAAGCGCTAC GTCATTCGAT CGGAACTTAG CTTTGGTGGC
CAAATTTGGC CAATTGAGAT CACCTTGACC AATCGAGAAA ATATGGCTTT TCGTATGTTG
TTAGGACGTA CCGCCATGCA CCATCGAATC ATGGTCGATC CTACAAAATC GTTTTTAATC
CCTTTCGAGG AGCCGAGTAA ATGA
 
Protein sequence
MKEKMIVGWR EELSLPGLGI ERIKAKIDTG ARTSCLHAFK VESFTKEGAQ WVRFWIHPMQ 
KNDQLVNVCE AEVIDERVVR DSGGHEEKRY VIRSELSFGG QIWPIEITLT NRENMAFRML
LGRTAMHHRI MVDPTKSFLI PFEEPSK