Gene VC0395_A1868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1868 
Symbol 
ID5137795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1985227 
End bp1986519 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content49% 
IMG OID640533325 
Producthypothetical protein 
Protein accessionYP_001217792 
Protein GI147675075 
COG category[R] General function prediction only 
COG ID[COG2252] Permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0492643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGAAA AGCTTTTTAA ACTCAGTGAA TACGGCACGA ACGTGCGCAC TGAGATCCTC 
GCTGGGGTCA CGACTTTCCT GACCATGGCT TACATTATTT TTGTTAACCC AGCCATTTTG
TCGGATGCGG GAATGGATCG CGGTGCGGTT TTCGTGGCGA CCTGTTTGGC GGCCGCGATT
GGCTGTTTCA TTATGGGTTT TATTGCCAAT TATCCTATCG CTCAAGCGCC AGGTATGGGG
CTTAATGCCT TCTTCACTTA TGGTGTGGTT CTTGGTATGG GACACACTTG GCAAGTCGCT
CTGGCCGCGG TGTTCTGCTC GGGCGTGCTG TTTATCCTAC TCAGCTTGTT CAAAATCCGT
GAGTGGATCA TCAACTCGAT TCCTCACTCT TTACGTACTG GCATTTCAGC GGGTATTGGT
CTGTTCTTAG CTTTCATCGC ATTAAAAAAT GCGGGCATTG TGGTCGATAA TCCGGCAACA
CTGGTTTCTT TAGGCGCAAT TACCTCGCTG CATGCGGTGT TGGCAGCAGT GGGCTTCTTC
CTGACGATTG GTTTAGTCTA TCGCGGTGTC AAAGGCGCGG TGATGATTGC TATTTTAGCG
GTGACAGCTC TCGGTCTCGT ATTTGGTGAT GTGCAATGGG GCGGCATTAT GTCTACGCCT
CCGAGTATCG CGCCGACCTT CATGCAACTC GATTTCTCTG CTGTCTTTGA GATCGGCATG
ATTTCTGTGG TGTTTGCGTT CTTGTTTGTT GACCTATTTG ACACTGCTGG CACCTTGGTT
GGCGTTGCAA CCAAAGCGGG ATTGATCGAA AAAGATGGCA AAATTCCGCG CCTGAATCGT
GCCCTGTTGG CGGATTCGAC AGCAACGTCT GTCGGCGCTC TGCTCGGTAC TTCAAACACC
ACTTCTTATA TTGAAAGTGT CTCCGGTGTT GCTGTTGGTG GCCGTACTGG TTTAACTGCT
GTGGTGGTTG GCATTTTGTT CCTTCTTGCA TTATTCTTCT CGCCACTAGC GGGTATGATC
CCAGCTTATG CGACGGCCGG TGCACTTTTC TATGTTGCTA TTCTGATGAT GTCGGGGTTA
GTGAGCATTG ATTGGCGTGA TCTGACTGAA GCGGCACCCA CTGTTGTTAC CTGTTTGATG
ATGCCTCTGA CATTCTCGAT TGCGGAAGGT ATCTCACTCG GTTTTATTGC TTATGCCGCA
ATCAAACTTT TCAGTGGTAA AGGACGCAGC GTCTCTCTCA GTGTATGGGT TATGGCGGCC
ATTTTTGTCA TCAAATACAT TTTGGCGGCG TAA
 
Protein sequence
MLEKLFKLSE YGTNVRTEIL AGVTTFLTMA YIIFVNPAIL SDAGMDRGAV FVATCLAAAI 
GCFIMGFIAN YPIAQAPGMG LNAFFTYGVV LGMGHTWQVA LAAVFCSGVL FILLSLFKIR
EWIINSIPHS LRTGISAGIG LFLAFIALKN AGIVVDNPAT LVSLGAITSL HAVLAAVGFF
LTIGLVYRGV KGAVMIAILA VTALGLVFGD VQWGGIMSTP PSIAPTFMQL DFSAVFEIGM
ISVVFAFLFV DLFDTAGTLV GVATKAGLIE KDGKIPRLNR ALLADSTATS VGALLGTSNT
TSYIESVSGV AVGGRTGLTA VVVGILFLLA LFFSPLAGMI PAYATAGALF YVAILMMSGL
VSIDWRDLTE AAPTVVTCLM MPLTFSIAEG ISLGFIAYAA IKLFSGKGRS VSLSVWVMAA
IFVIKYILAA