Gene VC0395_A1862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1862 
SymbolnrdR 
ID5136063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp1979793 
End bp1980242 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content48% 
IMG OID640533319 
Producttranscriptional regulator NrdR 
Protein accessionYP_001217786 
Protein GI147674568 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00283574 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTGTC CTTTCTGTTC TGAAAACGAT ACCAAAGTGA TCGATTCACG TCTGGTGGCT 
GACGGACATC AAGTGCGCCG TCGTCGTCAG TGTCTGGCTT GTAATGAGCG CTTTACCACC 
TTTGAAACCG CGGAGTTAGT GATGCCACGC GTGATCAAAT CGAATGGTAA TCGTGAGCCT 
TTTGATGAAG AGAAAATGAT TGGTGGCTTG CAGCGCGCAT TGGAAAAGCG CCCAGTGAGT 
GCCGATGCGA TTGAACTGGC GATCAGCACC ATAAAATCTA AGCTACGTGC CACTGGCGAG 
CGTGAAGTTC CGAGTAAACT GATTGGTAAC TTGGTGATGG AACAGCTGAA AGTGCTAGAT 
AAAGTGGCCT ATATTCGCTT TGCATCCGTA TATCGTAGTT TTGAAGATGT CCGTGAATTT 
GGCGAGGAGA TCGCCAAACT GCAGGACTAA
 
Protein sequence
MHCPFCSEND TKVIDSRLVA DGHQVRRRRQ CLACNERFTT FETAELVMPR VIKSNGNREP 
FDEEKMIGGL QRALEKRPVS ADAIELAIST IKSKLRATGE REVPSKLIGN LVMEQLKVLD 
KVAYIRFASV YRSFEDVREF GEEIAKLQD