Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1859 |
Symbol | ribB/A |
ID | 5136075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1976856 |
End bp | 1977965 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640533316 |
Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II |
Protein accession | YP_001217783 |
Protein GI | 147674884 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase [COG0807] GTP cyclohydrolase II |
TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.114165 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAATTA GCACCCCACA AGAGATCATT GAAGACATTC GTCAAGGCAA AATGGTCATC CTGATGGATG ATGAAGATCG TGAAAATGAA GGCGATCTGA TCATGGCGGC TGAGCACATT ACGCCAGCAG CGATCAATTT TATGGCAACC CATGGTCGCG GACTCATCTG TTTAACGCTC ACGAAAGAGC GTTGTCGCCG TCTGGGTTTA AATCCCATGG TACAAGATAA TAATGCCCAG TACACCACCA ATTTCACCGT TTCGATTGAA GCTGCCGAAG GCGTGACCAC CGGTATTTCA GCGGCGGATC GCGCGCGCAC AGTACAAGCG GCAGTGGCAA AAGAAGCGAA AGCGGCCGAT TTGGTTCAGC CGGGGCATAT TTTCCCGTTG GCTGCACAAG ATGGCGGAGT ATTAACGCGC GCTGGGCACA CAGAAGCTGG GTGTGATTTG GCACGCTTGG CAGGTTTAGA GCCCGCGTCG GTGATTGTGG AAATTCTTAA TGATGACGGC ACCATGGCGC GTCGTCCGGA CTTAGAAGTG TTCGCTGAAA AACACGGCTT AAAGCTGGGT ACGATTGCAG ACTTGATTGA GTACCGCAAC CACACCGAAA CCACCATTGA GCGTGTCGCG CAGTGTAAAC TGCCAACCGA ATATGGTGAG TTTGAGCTGG TGACTTACCG CGACATCATC GATAAGCAAA TCCACTTTGC TCTGCGTAAA GGCGATATTA CTAGTGCGCC AACTCTTGTG CGTGTGCATC TGCAAGATAC TTTTACCGAT CTGCTGCACA GCAACCGTGC GGCAGAGCGC AGTTGGCCAC TTGCGACAGC AATGCAGCGT ATTGGGCAAG AAGGCGGGGT GTTGGTGATC CTGGGTCATG AAGAATCGAG TGAGCTCTTG CTACACCGAG TGAAAATGTT TGAGCTGCAA GATAAAGGCG AAGCCCCTGC GATGGCCAAA AAACAAGGCA CTTCACGCCG GGTCGGGGTT GGCTCGCAAA TCCTTGCTGA TCTTGGAGTG AAAGAGATGC GTCTGCTCTC TTCACCAAAC AAAAAGTACC ACGCATTGGG TGGTTTTGGT CTCAATGTGG TCGAATACGT CTGCGAATAA
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Protein sequence | MPISTPQEII EDIRQGKMVI LMDDEDRENE GDLIMAAEHI TPAAINFMAT HGRGLICLTL TKERCRRLGL NPMVQDNNAQ YTTNFTVSIE AAEGVTTGIS AADRARTVQA AVAKEAKAAD LVQPGHIFPL AAQDGGVLTR AGHTEAGCDL ARLAGLEPAS VIVEILNDDG TMARRPDLEV FAEKHGLKLG TIADLIEYRN HTETTIERVA QCKLPTEYGE FELVTYRDII DKQIHFALRK GDITSAPTLV RVHLQDTFTD LLHSNRAAER SWPLATAMQR IGQEGGVLVI LGHEESSELL LHRVKMFELQ DKGEAPAMAK KQGTSRRVGV GSQILADLGV KEMRLLSSPN KKYHALGGFG LNVVEYVCE
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