Gene VC0395_A1857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1857 
SymbolnusB 
ID5135566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp1975651 
End bp1976121 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content47% 
IMG OID640533314 
Producttranscription antitermination protein NusB 
Protein accessionYP_001217781 
Protein GI147673228 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0201856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGGCCA GTGTGAAACC AGCCGCACGT CGTAATGCAC GTCAATTTGC GCTACAAGCA 
ATTTATTCAT GGCAAATTAC TAAAGAGAAT GTTGCGACTA TTGAAGAGCA ATTTCTAACC 
AGCGGTAAGT ACGATGAAGA AGAACATCGT GCCGCTGAGC CAGCTCTTGC TGCTCCTGAA 
ACCGATGTTT CTTATTTCCG TGATCTGCTG GCGGGTGTGG TTTTAAACCA TAATGAACTC 
GACAGCAAAC TGCGTCCTTT TGTTTCTCGT CCGATGCAAG ATCTGGACAT GATGGAACTG 
GCGCTACTGC GTTTGGCCAT GTATGAAATG ACGCGTCGTG AAGACGTACC ATACAAAGTG 
GTGATTAACG AGGCGATTGA ACTGGCAAAA GTGTTTGCTG CGGAAGATAG CCATAAATTC 
GTTAACGGTG TGCTGGATAA AGCCGCACCG CACGTACGTA AGAAAGCGTA A
 
Protein sequence
MGASVKPAAR RNARQFALQA IYSWQITKEN VATIEEQFLT SGKYDEEEHR AAEPALAAPE 
TDVSYFRDLL AGVVLNHNEL DSKLRPFVSR PMQDLDMMEL ALLRLAMYEM TRREDVPYKV 
VINEAIELAK VFAAEDSHKF VNGVLDKAAP HVRKKA