| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1853 |
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| Symbol | glnD |
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| ID | 5135404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1970735 |
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| End bp | 1973380 |
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| Gene Length | 2646 bp |
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| Protein Length | 881 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640533310 |
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| Product | PII uridylyl-transferase |
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| Protein accession | YP_001217777 |
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| Protein GI | 147673286 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
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| TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0172176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCATGGAC GCGCTATGCC GTATCAATCC CCTATCACAT TTCAAGAACC CCAACTGACG
GTAGAGAGCT TAAAGCAGCA GCTCGAAAGC TTTACTGAAT ACCAAAAGCA GGAGTTTTTC
GATCACCATC CAGTGACCGA CTTAGTGCTT GGCCGCTCCG AATACATGGA CTTGCTACTC
CACCGTTTGT GGCAATTTTT TGGCTTTGAT GAGCTGGTTG AAGTGAGCTT AGTCGCGGTT
GGGGGTTATG GGCGTGGTGA GCTACACCCT CTCTCAGACA TCGATCTCCT AGTCTTATCT
CAACAGCCGC TCAGCGAACA AGTCGCCAAT AAAATCAGCC AATTTCTCAC CCTGTTATGG
GATTTAAAAT TGGAGATTGG CCACGCGGTA CGAACCGTGG AACAGTGTGC TGAAATCGGT
AAAGCCGACC TCACTGTAGC CACTAACTTG CAAGAAGCGC GCTTACTGTG CGGCTGTGAA
GAGACCTTTC ATCGCCTGAA AATGGTGATC CATTCTGAGT CCTTCTGGCC AAGTGAAATC
TTCTATCAAG CCAAAGTGCG TGAGCAGAAA GAGCGCCACG CTCGATATCA CGACACCACC
TACAACTTAG AGCCAGACAT CAAATCGACT CCCGGTGGGC TACGCGATAT TCACACCTTA
AGTTGGGTCG CACGCCGCCA TTTTGGAGCA ACGTCCTTGT ATGAGATGAG CCGCTTTGGT
TTTCTGACCG ATGCCGAATA CCGTGAGCTG GTTGAGTGCC AAGACTTTTT ATGGCGCGTG
CGTTTTGCGC TGCACATTGA GCTGAAACGT TACGACAACC GCTTAACCTT CGCGCATCAA
GTGCAAGTTG CTCGTCATCT CGGTTACTTT GGTGAAGGCA ACCGTGGCAT AGAGATGATG
ATGAAAGAGT TTTTCCGCAC CCTGCGTCGT GTGGCTGAAC TCAACAAAAT GCTGCTGAAA
ATTTTCGATA AAGCGATCCT CAATAATGGT GAAGAAGCCG AAGCCGTGAT TATTGATGAT
GACTTCCAAC GCCGTGGCAA TATGATTGAA GCGCGTAAAC CCGCGCTATT TCAAGCTCGT
CCAGAAACTA TTCTGGATAT GTTTTTGCAC ATGGCCAGCG ACTCCACCAT CGAATCGGTT
GCGCCAGCCA CCATGCGCCA ATTACGCACG GCTCGTCGCC GACTGAATAA ATTTCTGCAC
ACCCTTCCCG CCGCACGCGA AAAGTTTATT GAGCTGGTAC GCCACCCCAA CGCACTGCAT
AAAGCGTTTA GCCAAATGCA CAAGCTGGGC GTACTTGCTG CTTATTTGCC CCAATGGAAC
CAGATTGTTG GCCAGATGCA GTTCGACTTG TTCCACGTCT ATACGGTGGA TGAACATAGT
ATTCGTCTAC TCAAACATAT CCATCTATTC AGTGATGCCA ATAACCACGA CCGCCACCCT
ATTTGCTGTG AAATTTACCC TAAAATTCAG AAAAAAGAGC TGCTCATCCT CGCGGCCATT
TTCCATGATA TCGGTAAAGG ACGCGGCGGT GATCATTCAG AAATTGGTGC TGATGAAGCG
TTTGATTTCT GTATTGAGCA CGGTTTATCT AAACCGGAAG CGAAATTGGT CGCTTGGCTG
GTCAAAAATC ACCTCCTGAT GTCAGTCACC GCGCAGCGTC GTGATATCTA CGATCCAGAT
GTGATCATCG AATTTGCCAA AAAAGTGCGT GATGAAGAGC GCCTCGAATA CTTGGTGTGT
TTAACCGTCG CTGACATCTG CGCCACCAAC CCTGAGCTTT GGAACAGTTG GAAACGGACT
TTGTTGGCAG AGCTCTTTTA CTCAACCCAG CGCGCGCTAC GGCGCGGCCT AGAAAATCCC
GTCGATGTCC GTGAACGCAT TCGTCATAAC CAGCAAATGG CCTCTGCCTT ACTGCGCAAA
GAAGGCTTCT CTAGCCGTGA AATTGAGGTG TTGTGGCAGC GCTTTAAAGC CGATTATTTC
TTGCGCCATA CTCATAAACA GATCGCGTGG CACTGCACCC ATTTATTACG CCATGAAGAC
AGTAGCAAAC CTTTGGTTTT ACTCAGCAAA AAAGCCACTC GCGGCGGAAC GGAAGTTTTT
ATCTACACCA AGGATCAGGC TGCTTTATTT GCGACTGTGG TTGCCGAGCT CGACCGACGT
AATCTGAACG TGCATGACGC GCAAATCATG GCCAGTAAAG ACGGTTATGT ACTCGATACT
TTCATGGTAC TTGACCAAAA TGGGCAAGCC ATTGAAGAAG ATCGCCATCA AGCACTGATT
CGTCATCTGG TGCATGTACT GGAAGATGGT CGTCCTACCA CGCAAAAGGC AAGGCGCATT
CCTCGTAACT TGCAGCACTT TAAAGTCAAA ACTCAGGTTG ATTTTCTACC AACCAAGAGT
AAAAAGCGCA CCTTAATGGA ATTCGTCGCG CTGGATACGC CGGGACTACT GGCTACCGTC
GGAGCAACCT TTGCCGAACT CAACTTGGAT TTGCATGCGG CTAAAATCAC GACCATAGGT
GAGCGCGCAG AAGACTTATT CATTTTGACC AACGCCCAAG GCACGCGCCT CAATGAAGAG
GAGGAGCAGC ACTTGCGCGA GAAATTGATT GAACATGTCG CAGAGCTCGC GCCTAGCGCT
CAGTAG
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| Protein sequence | MHGRAMPYQS PITFQEPQLT VESLKQQLES FTEYQKQEFF DHHPVTDLVL GRSEYMDLLL
HRLWQFFGFD ELVEVSLVAV GGYGRGELHP LSDIDLLVLS QQPLSEQVAN KISQFLTLLW
DLKLEIGHAV RTVEQCAEIG KADLTVATNL QEARLLCGCE ETFHRLKMVI HSESFWPSEI
FYQAKVREQK ERHARYHDTT YNLEPDIKST PGGLRDIHTL SWVARRHFGA TSLYEMSRFG
FLTDAEYREL VECQDFLWRV RFALHIELKR YDNRLTFAHQ VQVARHLGYF GEGNRGIEMM
MKEFFRTLRR VAELNKMLLK IFDKAILNNG EEAEAVIIDD DFQRRGNMIE ARKPALFQAR
PETILDMFLH MASDSTIESV APATMRQLRT ARRRLNKFLH TLPAAREKFI ELVRHPNALH
KAFSQMHKLG VLAAYLPQWN QIVGQMQFDL FHVYTVDEHS IRLLKHIHLF SDANNHDRHP
ICCEIYPKIQ KKELLILAAI FHDIGKGRGG DHSEIGADEA FDFCIEHGLS KPEAKLVAWL
VKNHLLMSVT AQRRDIYDPD VIIEFAKKVR DEERLEYLVC LTVADICATN PELWNSWKRT
LLAELFYSTQ RALRRGLENP VDVRERIRHN QQMASALLRK EGFSSREIEV LWQRFKADYF
LRHTHKQIAW HCTHLLRHED SSKPLVLLSK KATRGGTEVF IYTKDQAALF ATVVAELDRR
NLNVHDAQIM ASKDGYVLDT FMVLDQNGQA IEEDRHQALI RHLVHVLEDG RPTTQKARRI
PRNLQHFKVK TQVDFLPTKS KKRTLMEFVA LDTPGLLATV GATFAELNLD LHAAKITTIG
ERAEDLFILT NAQGTRLNEE EEQHLREKLI EHVAELAPSA Q
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