| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1845 |
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| Symbol | dxr |
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| ID | 5136081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1963269 |
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| End bp | 1964477 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640533302 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_001217769 |
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| Protein GI | 147674244 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000000972019 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAAAC TAACCATTTT AGGTGCCACA GGTTCGATAG GAGCCAGCAC CCTTAAGGTG
ATAGCCCAAA ATCCACAGCA GTTTTCCATT GTTGCGTTAG TGGCTGGGGT CAACGTAGCC
AAAATGTACC AGCTGTGCCA ACAGTGGCGG CCGAAATATG CCGTTATGGC AACGGCGTCA
GCAGCATCTG AGTTGCAAGG CTTGCTCAAA AACCAAGCGA TGGCGACCGA AGTGCTGTAC
GGCGAAGAGG CGATGTGCCA AGTCGCGGCG CTGGATGATG TGGATACCGT GATGGCGGCC
ATTGTTGGGG CCGCAGGTTT GTTACCCACC ATGGCGGCGG TGAAAGCGGG TAAGCGTGTG
TTACTTGCCA ATAAAGAAGC ATTGGTCATG TCGGGACAGC TATTTATTGA TGCTGTCGCA
CAATCTGGCG CTGAATTAAT GCCCGTAGAT AGTGAACACA ACGCGATTTT CCAATGTCTG
CCGACTGAAA TCCAAACTCA GTTGGGGCGC TGTGATTTAT CTCAACACGG TATCGACCAT
ATTTTGCTCA CGGGCTCTGG CGGCCCTTTC CGCTATAGCG ACCTTGCGAC CTTAGATAGC
GTGACTCCTG AGCAGGCGAT TGCTCATCCA AACTGGTCAA TGGGACCGAA AATTTCGGTA
GATTCCGCGA CCATGATGAA CAAAGGCCTT GAATACATTG AAGCTAAATG GCTATTTAAC
ACGTCACGTG AACAGCTCAA AGTGCTCATC CATCCTCAGT CGGTGATCCA CTCTATGGTG
CAATACCAAG ATGGTTCAGT GATTGCTCAG TTGGGCGAGC CGGATATGGC AACGCCAATC
TCCTATGCCA TGGCTTATCC TGAGCGAGTG ACCGCGGGAG TGCCAGCACT GGATTTTACG
CGTTTGCAGC AACTGACCTT TATGGAGGTC GATTTTGCGC GCTACCCGTG CTTGCAATTA
GCGATGGATG CGTGTTTCCT CGGCCAACAT GCGACAACCT CGCTCAATGC AGCCAATGAA
GTAGCCGTTG ACGCGTTTTT AAAGCGGAAA ATACGGTTTA CTGACATTGC ACTCATCAAT
GATCAAGTAT TGTCCAAGGT CTGTGCGACC AACACCCAGT TACATTGCCG TGACTTGGAA
AGCCTGCTTG AGCTAGATAC AATGGCTCGG CATTTTGCCC ATCAAGTACT CAAAGAGCGC
CAAGCATGA
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| Protein sequence | MRKLTILGAT GSIGASTLKV IAQNPQQFSI VALVAGVNVA KMYQLCQQWR PKYAVMATAS
AASELQGLLK NQAMATEVLY GEEAMCQVAA LDDVDTVMAA IVGAAGLLPT MAAVKAGKRV
LLANKEALVM SGQLFIDAVA QSGAELMPVD SEHNAIFQCL PTEIQTQLGR CDLSQHGIDH
ILLTGSGGPF RYSDLATLDS VTPEQAIAHP NWSMGPKISV DSATMMNKGL EYIEAKWLFN
TSREQLKVLI HPQSVIHSMV QYQDGSVIAQ LGEPDMATPI SYAMAYPERV TAGVPALDFT
RLQQLTFMEV DFARYPCLQL AMDACFLGQH ATTSLNAANE VAVDAFLKRK IRFTDIALIN
DQVLSKVCAT NTQLHCRDLE SLLELDTMAR HFAHQVLKER QA
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