Gene VC0395_A1841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1841 
SymbollpxD 
ID5135143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp1957865 
End bp1958920 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content49% 
IMG OID640533298 
ProductUDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
Protein accessionYP_001217765 
Protein GI147675586 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0291196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACAC TCACTTTAGC CGAATTGGCT ACTATCACCG GGGGGGAGTT GTTCGGTGAT 
CCAACAGCAC TGGTCAGTGC CGTTGCGCCT ATGGATAAGG CACAGCTTGG ACATGTGACA 
TTCTTGTCTA ATCCTAAATA CAGTAAGCAC TTAGGTGATT GTAAAGCCAC GGTGATCATG 
GTGAAAACCA GTGAGCGAGA ACTCTGTCCG AGTAACGCTC TGGTGGTTGC CGATCCGTAT 
GTTGCATTTG CTAAAGTGGC TCAGGCGCTG GATTCAACTC CTTCTCCTGC ACACGGTATT 
GCACCGAGTG CTGTGATTGC TGAAGATGCA AAGTTAGGTC ACAACGTTTC GATTGGGGCA 
AATGCGGTCA TTGAGTCAGG TGTTCAGCTT GGCGATAACG TAGTGATTGG TGCTGGCTGT 
TTTATCGGTA AACAAGCGCG TTTGGGCGAT AACACTAAGC TTTGGGCCAA TGTAACGATT 
TACCACAAAG TGGAAATCGG CTCAGATTGT TTGATTCAAT CTGGAACCGT GATTGGTGCT 
GATGGCTTTG GCTATGCGAA TGAGCGTGGC GAGTGGATTA AAATTCCTCA GCTTGGCTCT 
GTGCGTATTG GTGATCGCGT TGAGATTGGT GCTTGCACCA CCATCGACCG CGGCGCGCTG 
GATGATACGG TGATTGAAGA TAACGTGATC ATCGATAATC AGCTGCAAAT CGCTCACAAC 
GTGCACATCG GATATGGTAG TGCGCTGGCG GGTGGTACAG TAATCGCCGG CAGTACACGC 
ATTGGCAAGT ACTGTATTAT TGGTGGCGCT AGCGTGATTA ACGGACATAT CGAAATTGCC 
GATGGGGTGA CCATCACTGG CATGGGTATG GTGATGCGCA GTATTGAGGA GAAGGGGATG 
TACTCTTCGG GTATTCCTCT GCAAACCAAT AAAGAGTGGC GTAAAACGGC CGCTCGCGTA 
CACCGTATTG ACGATATGCA TAAGCGACTG AAAGCTTTAG AAAAGTTGCT TGAGCAATCC 
GACACGGTAC AGCCCGATAA CTCTCAAGCT GAATAA
 
Protein sequence
MTTLTLAELA TITGGELFGD PTALVSAVAP MDKAQLGHVT FLSNPKYSKH LGDCKATVIM 
VKTSERELCP SNALVVADPY VAFAKVAQAL DSTPSPAHGI APSAVIAEDA KLGHNVSIGA 
NAVIESGVQL GDNVVIGAGC FIGKQARLGD NTKLWANVTI YHKVEIGSDC LIQSGTVIGA 
DGFGYANERG EWIKIPQLGS VRIGDRVEIG ACTTIDRGAL DDTVIEDNVI IDNQLQIAHN 
VHIGYGSALA GGTVIAGSTR IGKYCIIGGA SVINGHIEIA DGVTITGMGM VMRSIEEKGM 
YSSGIPLQTN KEWRKTAARV HRIDDMHKRL KALEKLLEQS DTVQPDNSQA E