| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1839 |
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| Symbol | lpxA |
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| ID | 5135292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1956538 |
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| End bp | 1957326 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533296 |
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| Product | UDP-N-acetylglucosamine acyltransferase |
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| Protein accession | YP_001217763 |
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| Protein GI | 147674688 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1043] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase |
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| TIGRFAM ID | [TIGR01852] acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.343725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCACG AAACTGCACA AATTCACCCA ACTTCCGTCG TGGAAGAGGG CGCTATCATT
GGTGCCAACG TTAAGATTGG TCCTTTCTGT TTTGTCGATA GCAAAGTCGA GATCGGTGAA
GGTACTGAGC TGCTATCGCA CGTTGTGGTC AAGGGGCCAA CTAAAATCGG TCGCTTCAAC
CGGATTTTCC AGTTTGCTTC AATTGGTGAA GCGTGTCAGG ACCTGAAATA CGCTGGTGAA
GATACGCAGC TCATCATTGG TGATCGCAAT ACGATTCGCG AAAGCGTCAC CATGCACCGC
GGTACAGTGC AAGATAAAGG CATCACTATC GTGGGTAGCG ACAACCTATT TATGATCAAC
GCCCACGTTG CGCATGACTG TGTGATTGGC GATCGCTGTA TTTTTGCCAA CAACGCGACC
TTAGCGGGTC ACGTAAAAGT GGGCAACCAA GCGATTGTGG GTGGCATGTC CGCCATTCAC
CAGTTCTGCC ATATTGGCGA TCACTGTATG CTGGGTGGCG GCTCTATTGT GGTGCAAGAT
GTGCCACCGT ACGTGATGGC GCAAGGTAAC CACTGTGCAC CGTTTGGTAT TAACGTGGAA
GGCTTAAAAC GCCGTGGCTT TGATAAAGCA GAAATTCATG CGATTCGCCG TGCCTACAAA
TCCTTGTACC GCAATGGTTT GACCCTTGAA GCAGCCAAGG CTGAGATTGC CCAAGAAGCT
GAGCAATACC CTAGTGTGAA ACTGTTCCTC GATTTCCTTG AGAAATCTGA GCGTGGCATT
ATTCGCTAA
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| Protein sequence | MIHETAQIHP TSVVEEGAII GANVKIGPFC FVDSKVEIGE GTELLSHVVV KGPTKIGRFN
RIFQFASIGE ACQDLKYAGE DTQLIIGDRN TIRESVTMHR GTVQDKGITI VGSDNLFMIN
AHVAHDCVIG DRCIFANNAT LAGHVKVGNQ AIVGGMSAIH QFCHIGDHCM LGGGSIVVQD
VPPYVMAQGN HCAPFGINVE GLKRRGFDKA EIHAIRRAYK SLYRNGLTLE AAKAEIAQEA
EQYPSVKLFL DFLEKSERGI IR
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