Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1837 |
Symbol | rnhB |
ID | 5135539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1954593 |
End bp | 1955213 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640533294 |
Product | ribonuclease HII |
Protein accession | YP_001217761 |
Protein GI | 147673627 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAAGA AACCAAGCAT TGAGCTGCCT CCCTTTGAGA TTCCTGCAGG TTATGCCTTG ATTGCTGGAG TGGATGAAGT CGGGCGCGGC CCACTGGTGG GGGATGTCGT CACGGCAGCA GTGATCCTTG ACCCTAATCG GCCGATTATG GGCTTGAATG ATTCCAAAAA GCTCAGTGAG AAAAAACGCT TAGCCCTGTT TCCTGAGATT CAGGTAAAAG CCTTAGCTTG GGCGGTGGGG CGCTGTTCGC CGCAAGAAAT TGATGAGCTG AACATCTTCC AAGCCACCAT GGTCGCAATG CAGCGCGCCG TCGCAGGGTT GCGCATTCAG CCTGATTTGG TATTGATTGA TGGCAATAAA ATTCCCAAGC TCCCAATGGA GGCGCAAGCC GTGGTTAAAG GCGATCTGCG TGTCGCGCAA ATCAGTGCCG CTTCGATTAT TGCCAAAGTG ATCCGCGACC AAGAGATGGA AGCGTTGGAT AAACAATATC CTCAGTTTGG TTTCGCCAAG CACAAAGGTT ACCCAACCGC CGCGCATTTT GCTGCCATTG AGCAGCATGG AGTGATTGAG CAGCACCGTA AAAGTTTTGG CCCAGTAAAA CGTGCTCTTG GTATAGAATA G
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Protein sequence | MAKKPSIELP PFEIPAGYAL IAGVDEVGRG PLVGDVVTAA VILDPNRPIM GLNDSKKLSE KKRLALFPEI QVKALAWAVG RCSPQEIDEL NIFQATMVAM QRAVAGLRIQ PDLVLIDGNK IPKLPMEAQA VVKGDLRVAQ ISAASIIAKV IRDQEMEALD KQYPQFGFAK HKGYPTAAHF AAIEQHGVIE QHRKSFGPVK RALGIE
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