Gene VC0395_A1837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1837 
SymbolrnhB 
ID5135539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1954593 
End bp1955213 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content52% 
IMG OID640533294 
Productribonuclease HII 
Protein accessionYP_001217761 
Protein GI147673627 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAGA AACCAAGCAT TGAGCTGCCT CCCTTTGAGA TTCCTGCAGG TTATGCCTTG 
ATTGCTGGAG TGGATGAAGT CGGGCGCGGC CCACTGGTGG GGGATGTCGT CACGGCAGCA
GTGATCCTTG ACCCTAATCG GCCGATTATG GGCTTGAATG ATTCCAAAAA GCTCAGTGAG
AAAAAACGCT TAGCCCTGTT TCCTGAGATT CAGGTAAAAG CCTTAGCTTG GGCGGTGGGG
CGCTGTTCGC CGCAAGAAAT TGATGAGCTG AACATCTTCC AAGCCACCAT GGTCGCAATG
CAGCGCGCCG TCGCAGGGTT GCGCATTCAG CCTGATTTGG TATTGATTGA TGGCAATAAA
ATTCCCAAGC TCCCAATGGA GGCGCAAGCC GTGGTTAAAG GCGATCTGCG TGTCGCGCAA
ATCAGTGCCG CTTCGATTAT TGCCAAAGTG ATCCGCGACC AAGAGATGGA AGCGTTGGAT
AAACAATATC CTCAGTTTGG TTTCGCCAAG CACAAAGGTT ACCCAACCGC CGCGCATTTT
GCTGCCATTG AGCAGCATGG AGTGATTGAG CAGCACCGTA AAAGTTTTGG CCCAGTAAAA
CGTGCTCTTG GTATAGAATA G
 
Protein sequence
MAKKPSIELP PFEIPAGYAL IAGVDEVGRG PLVGDVVTAA VILDPNRPIM GLNDSKKLSE 
KKRLALFPEI QVKALAWAVG RCSPQEIDEL NIFQATMVAM QRAVAGLRIQ PDLVLIDGNK
IPKLPMEAQA VVKGDLRVAQ ISAASIIAKV IRDQEMEALD KQYPQFGFAK HKGYPTAAHF
AAIEQHGVIE QHRKSFGPVK RALGIE