Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1829 |
Symbol | mltD |
ID | 5135578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 1944313 |
End bp | 1945911 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640533286 |
Product | membrane-bound lytic murein transglycosylase D |
Protein accession | YP_001217753 |
Protein GI | 147673804 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAGTTA AATTCAGTTG GGTATTGGCG TTGCTGCTCG TTGGCTGTCA ATCCCCCCAA CCTGTGGATA CGACCACATC AGATGACCAA GCGGTAAACC CGCCCACTCA ATCTGCTACC GTGAAAAAAA AGCGTAAGCC GCAAACGACT GCAACTCTGC CTGCTGGCGA AACGGAGAGT GTAGAAGAAG AGCGCGTCGC GCTGACACCA CAAGAACAAG ACGATGTATG GCAACGCATT GCTATGCAGT TCAAGCTCGG CATCCCCAAA GACCCAAGTG TTGATGCACA ACGCGAATGG TTTCTCAAAA ACCCAGGTCA CTTACAAGCG ATTGCCAGTC GTGCTGAACC TTTCCTCTAT CTGATCACTG AAAAAGTCGA GCAACGCGGC CTGCCGCTAG AATTGGTGCT GTTACCGATT GTCGAAAGCT CGTTCGATCC TTTTGCCTAT TCCCACGGCA GTGCTGCAGG CTTATGGCAG TTTATTTCGT CTACCGGCAA GCGTTATGGT CTCAAACAAA ATTTCTGGTA TGACGGCCGA CGAGATGTCG CCGCCGCCAC AGACGCTGCG CTGGATTATC TTACTGTCTT GAACCAACAC TTCGATGGTG ACTGGTATCA CGCCATCGCC GCTTACAACA GTGGTGAAGG GCGCGTGGCC CGCGCCATTA AAGCCAATAA AAAAGCGGGT AAACCTATCG ATTTCTTCTC GCTGGATCTG CCTAAAGAGA CCAGCGGTTA TGTCCCTAAA CTGATTGCAC TAGCCGATGT GATTGCCAAT CAGGAAAAAT ACGGTATCTC CATCCCAGCA ATCGAAAACC GCCCAGTGTT AGCCACCGTT GACCCGAAAG AGCAGTTGGA TCTTGCGATT GCCGCTCGAT ATGCAGGTCT AACGGTTAAA GAGCTGCAAA GCTTTAACCC TGCCTATAAC CAATGGGCAA CGGCTCCAAA TGGCCCACAT CAACTGCTGA TCCCCGTTGA AAAAGTTGAA CGTTTTAATC TAGCCATGGA AGAGAACCGC GGCAAAGGGA TTAAGGTGGT TCGCTATAAG GTGAAATCGG GTGATACTCT CAGCACCATT GCCGATAAGT ACAACACCAC GGCTAAAGTG ATCAAAGAAG CCAACCAGAT TGCCAGCAAC CAAATTCGTG TGGGTAGCTA TCTGTTCGTA CCAACCTCGG TGAAAGATGA GAAAGCGTAT GCACTGAGCG TGAGCAATCG CTTAGCCAAG ACCCAATCCG TGCCACGTGG ACAGTATCAG TTGACGCACA CCGTCAACTC AGGGGAAAGC CTCTGGACCA TCGCCAAGCA GTATAACGTG CCTTACCAAT CTCTGGCGAA ATGGAATGGC ATGGCACCGA AAGATGCGCT GCGTAAAGGT CAGAAATTGG TGATCTGGAA AGACAGTAAA CCAACGAGTG GCGTGATCCG CACGGTAACT TACAAAGTGC GCTCTGGCGA TACACTGAGT GGTATTGCCA ATAAGTTTAA AGTGAAAACT GCTGACATCG TTAAGTGGAA TGATTTAAAC AGCACTCAAT ATCTCAAGGC GGGTCAGCAA CTGAAACTGT ATGTGGATGT GACCAAATTC AGCGCATAA
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Protein sequence | MRVKFSWVLA LLLVGCQSPQ PVDTTTSDDQ AVNPPTQSAT VKKKRKPQTT ATLPAGETES VEEERVALTP QEQDDVWQRI AMQFKLGIPK DPSVDAQREW FLKNPGHLQA IASRAEPFLY LITEKVEQRG LPLELVLLPI VESSFDPFAY SHGSAAGLWQ FISSTGKRYG LKQNFWYDGR RDVAAATDAA LDYLTVLNQH FDGDWYHAIA AYNSGEGRVA RAIKANKKAG KPIDFFSLDL PKETSGYVPK LIALADVIAN QEKYGISIPA IENRPVLATV DPKEQLDLAI AARYAGLTVK ELQSFNPAYN QWATAPNGPH QLLIPVEKVE RFNLAMEENR GKGIKVVRYK VKSGDTLSTI ADKYNTTAKV IKEANQIASN QIRVGSYLFV PTSVKDEKAY ALSVSNRLAK TQSVPRGQYQ LTHTVNSGES LWTIAKQYNV PYQSLAKWNG MAPKDALRKG QKLVIWKDSK PTSGVIRTVT YKVRSGDTLS GIANKFKVKT ADIVKWNDLN STQYLKAGQQ LKLYVDVTKF SA
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