| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1829 |
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| Symbol | mltD |
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| ID | 5135578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1944313 |
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| End bp | 1945911 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533286 |
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| Product | membrane-bound lytic murein transglycosylase D |
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| Protein accession | YP_001217753 |
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| Protein GI | 147673804 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAGTTA AATTCAGTTG GGTATTGGCG TTGCTGCTCG TTGGCTGTCA ATCCCCCCAA
CCTGTGGATA CGACCACATC AGATGACCAA GCGGTAAACC CGCCCACTCA ATCTGCTACC
GTGAAAAAAA AGCGTAAGCC GCAAACGACT GCAACTCTGC CTGCTGGCGA AACGGAGAGT
GTAGAAGAAG AGCGCGTCGC GCTGACACCA CAAGAACAAG ACGATGTATG GCAACGCATT
GCTATGCAGT TCAAGCTCGG CATCCCCAAA GACCCAAGTG TTGATGCACA ACGCGAATGG
TTTCTCAAAA ACCCAGGTCA CTTACAAGCG ATTGCCAGTC GTGCTGAACC TTTCCTCTAT
CTGATCACTG AAAAAGTCGA GCAACGCGGC CTGCCGCTAG AATTGGTGCT GTTACCGATT
GTCGAAAGCT CGTTCGATCC TTTTGCCTAT TCCCACGGCA GTGCTGCAGG CTTATGGCAG
TTTATTTCGT CTACCGGCAA GCGTTATGGT CTCAAACAAA ATTTCTGGTA TGACGGCCGA
CGAGATGTCG CCGCCGCCAC AGACGCTGCG CTGGATTATC TTACTGTCTT GAACCAACAC
TTCGATGGTG ACTGGTATCA CGCCATCGCC GCTTACAACA GTGGTGAAGG GCGCGTGGCC
CGCGCCATTA AAGCCAATAA AAAAGCGGGT AAACCTATCG ATTTCTTCTC GCTGGATCTG
CCTAAAGAGA CCAGCGGTTA TGTCCCTAAA CTGATTGCAC TAGCCGATGT GATTGCCAAT
CAGGAAAAAT ACGGTATCTC CATCCCAGCA ATCGAAAACC GCCCAGTGTT AGCCACCGTT
GACCCGAAAG AGCAGTTGGA TCTTGCGATT GCCGCTCGAT ATGCAGGTCT AACGGTTAAA
GAGCTGCAAA GCTTTAACCC TGCCTATAAC CAATGGGCAA CGGCTCCAAA TGGCCCACAT
CAACTGCTGA TCCCCGTTGA AAAAGTTGAA CGTTTTAATC TAGCCATGGA AGAGAACCGC
GGCAAAGGGA TTAAGGTGGT TCGCTATAAG GTGAAATCGG GTGATACTCT CAGCACCATT
GCCGATAAGT ACAACACCAC GGCTAAAGTG ATCAAAGAAG CCAACCAGAT TGCCAGCAAC
CAAATTCGTG TGGGTAGCTA TCTGTTCGTA CCAACCTCGG TGAAAGATGA GAAAGCGTAT
GCACTGAGCG TGAGCAATCG CTTAGCCAAG ACCCAATCCG TGCCACGTGG ACAGTATCAG
TTGACGCACA CCGTCAACTC AGGGGAAAGC CTCTGGACCA TCGCCAAGCA GTATAACGTG
CCTTACCAAT CTCTGGCGAA ATGGAATGGC ATGGCACCGA AAGATGCGCT GCGTAAAGGT
CAGAAATTGG TGATCTGGAA AGACAGTAAA CCAACGAGTG GCGTGATCCG CACGGTAACT
TACAAAGTGC GCTCTGGCGA TACACTGAGT GGTATTGCCA ATAAGTTTAA AGTGAAAACT
GCTGACATCG TTAAGTGGAA TGATTTAAAC AGCACTCAAT ATCTCAAGGC GGGTCAGCAA
CTGAAACTGT ATGTGGATGT GACCAAATTC AGCGCATAA
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| Protein sequence | MRVKFSWVLA LLLVGCQSPQ PVDTTTSDDQ AVNPPTQSAT VKKKRKPQTT ATLPAGETES
VEEERVALTP QEQDDVWQRI AMQFKLGIPK DPSVDAQREW FLKNPGHLQA IASRAEPFLY
LITEKVEQRG LPLELVLLPI VESSFDPFAY SHGSAAGLWQ FISSTGKRYG LKQNFWYDGR
RDVAAATDAA LDYLTVLNQH FDGDWYHAIA AYNSGEGRVA RAIKANKKAG KPIDFFSLDL
PKETSGYVPK LIALADVIAN QEKYGISIPA IENRPVLATV DPKEQLDLAI AARYAGLTVK
ELQSFNPAYN QWATAPNGPH QLLIPVEKVE RFNLAMEENR GKGIKVVRYK VKSGDTLSTI
ADKYNTTAKV IKEANQIASN QIRVGSYLFV PTSVKDEKAY ALSVSNRLAK TQSVPRGQYQ
LTHTVNSGES LWTIAKQYNV PYQSLAKWNG MAPKDALRKG QKLVIWKDSK PTSGVIRTVT
YKVRSGDTLS GIANKFKVKT ADIVKWNDLN STQYLKAGQQ LKLYVDVTKF SA
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