Gene VC0395_A1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1827 
Symbol 
ID5136035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1942708 
End bp1943445 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content45% 
IMG OID640533284 
Producthypothetical protein 
Protein accessionYP_001217751 
Protein GI147673588 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCAG CACGCAGTGA TAAAGCGCTT GAAAATCCAC ACTCATGGGC TCAATTGAAA 
AATGGCCAAT GGGTGAGTGA ATCTATTCAG ACCCGTTTAG ATGAATGGTG CCCAAAACTT
TTTGGTTACC ATATGTTAAA GCTCGGCGGT CTGAGCTGTG AGCTTGCCAG TTGTACCTGC
AATATTCAAC ACCAAGTACA CCTCGATATT GAAAATCCGT TGCATACGGT GATTGCCGAT
AAATATGAGC TGCCGTTTTT GGAGAAGAGT ATTGATGTGG CGATTTTGGC GCATCAACTC
GACTACAGTA ACGATCCTCA CCGTTTATTA CGGGAAGTGG ATCGAGTCTT GATTGATGAT
GGTTATCTGA TCATCACCGG TTTTAACCCA ATCAGTTTTA TTGGCTTAGC CAGCCTGATG
CCTTGGCGCA AAAACAACTT ACCTTGGAGT GGGCGAATGT TTACCCCGAA TCGGATTAAA
GATTGGCTAA GCGTACTCAA TTACCAAGTG GTTGCTTGCG ATCAGTACGC CTTGTTTCCG
ATGCAAAAAT ACCGACCTTT CTGGACTTGG TTGGAAAACG GCCTCGGTGG CTCAAATTCG
CCCTTTGGTA GCCTGTACTT TATTGTTGCG CGCAAACGTA CTTGCCCACT CAAGCCGATT
CGTTCTAAAT GGCGTTTGAA GCGAAGATTA TCGCCGATTG GGGTCAACTA TCGAGTTAAT
AGTAAGTCGC AGTCGTGA
 
Protein sequence
MKPARSDKAL ENPHSWAQLK NGQWVSESIQ TRLDEWCPKL FGYHMLKLGG LSCELASCTC 
NIQHQVHLDI ENPLHTVIAD KYELPFLEKS IDVAILAHQL DYSNDPHRLL REVDRVLIDD
GYLIITGFNP ISFIGLASLM PWRKNNLPWS GRMFTPNRIK DWLSVLNYQV VACDQYALFP
MQKYRPFWTW LENGLGGSNS PFGSLYFIVA RKRTCPLKPI RSKWRLKRRL SPIGVNYRVN
SKSQS