Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1827 |
Symbol | |
ID | 5136035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1942708 |
End bp | 1943445 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640533284 |
Product | hypothetical protein |
Protein accession | YP_001217751 |
Protein GI | 147673588 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 60 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCAG CACGCAGTGA TAAAGCGCTT GAAAATCCAC ACTCATGGGC TCAATTGAAA AATGGCCAAT GGGTGAGTGA ATCTATTCAG ACCCGTTTAG ATGAATGGTG CCCAAAACTT TTTGGTTACC ATATGTTAAA GCTCGGCGGT CTGAGCTGTG AGCTTGCCAG TTGTACCTGC AATATTCAAC ACCAAGTACA CCTCGATATT GAAAATCCGT TGCATACGGT GATTGCCGAT AAATATGAGC TGCCGTTTTT GGAGAAGAGT ATTGATGTGG CGATTTTGGC GCATCAACTC GACTACAGTA ACGATCCTCA CCGTTTATTA CGGGAAGTGG ATCGAGTCTT GATTGATGAT GGTTATCTGA TCATCACCGG TTTTAACCCA ATCAGTTTTA TTGGCTTAGC CAGCCTGATG CCTTGGCGCA AAAACAACTT ACCTTGGAGT GGGCGAATGT TTACCCCGAA TCGGATTAAA GATTGGCTAA GCGTACTCAA TTACCAAGTG GTTGCTTGCG ATCAGTACGC CTTGTTTCCG ATGCAAAAAT ACCGACCTTT CTGGACTTGG TTGGAAAACG GCCTCGGTGG CTCAAATTCG CCCTTTGGTA GCCTGTACTT TATTGTTGCG CGCAAACGTA CTTGCCCACT CAAGCCGATT CGTTCTAAAT GGCGTTTGAA GCGAAGATTA TCGCCGATTG GGGTCAACTA TCGAGTTAAT AGTAAGTCGC AGTCGTGA
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Protein sequence | MKPARSDKAL ENPHSWAQLK NGQWVSESIQ TRLDEWCPKL FGYHMLKLGG LSCELASCTC NIQHQVHLDI ENPLHTVIAD KYELPFLEKS IDVAILAHQL DYSNDPHRLL REVDRVLIDD GYLIITGFNP ISFIGLASLM PWRKNNLPWS GRMFTPNRIK DWLSVLNYQV VACDQYALFP MQKYRPFWTW LENGLGGSNS PFGSLYFIVA RKRTCPLKPI RSKWRLKRRL SPIGVNYRVN SKSQS
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