| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1825 |
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| Symbol | dnaQ |
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| ID | 5137850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1941367 |
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| End bp | 1942110 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640533282 |
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| Product | DNA polymerase III subunit epsilon |
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| Protein accession | YP_001217749 |
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| Protein GI | 147674786 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACTA GCAACAATGC AGAATACCAA CGCATCGTGG TGCTCGATAC CGAAACCACG
GGTATGAACC GCGAAGGCGG CCCCCATTAC GAGGGACATC GAATTATTGA GATCGGTGCA
GTTGAAATTA TCAACCGTAA ACTCACCGGA CGGCATTTTC ACGTCTACTT AAAACCAGAT
CGCGATATTC AATTAGAGGC GATTGAAGTT CACGGTATTA CCGATGAGTT TCTAAAAGAT
AAGCCCGAGT ACAAAGATGT CCATGAGGAG TTTGTAGACT TCATCAAAGG GGCCGAGCTG
GTTGCCCACA ATGCACCGTT TGACGTCGGC TTTATGGATT ACGAGTTTGC TAAACTCGGT
GGTGCGATCG GTAAAACCAG CGATTTTTGC AAAGTGACCG ATACTTTGGC GATGGCCAAG
CGGATTTTCC CCGGTAAACG CAATAACTTG GATATCTTGT GTGAGCGTTA CGGCATTGAT
AACTCACACC GAACCCTGCA CGGCGCTTTG CTCGATGCGG AGATTCTAGC CGACGTTTAT
CTATTGATGA CCGGTGGGCA GACTTCACTG CAATTTTCAT CGGTCACGCA AAATAGTGGG
GAATTGAGCG CAGAATCGTT AAAACGTGCT CGTTCAGAGC GAAAAGCGTT AAAGGTTTTA
GCGGCTAGCG CCGATGAACT ACAAGCACAT CAAGATCGTT TGGACATAGT GGCCAAAAGT
GGCACTTGCC TATGGCGTAG TTAG
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| Protein sequence | MNTSNNAEYQ RIVVLDTETT GMNREGGPHY EGHRIIEIGA VEIINRKLTG RHFHVYLKPD
RDIQLEAIEV HGITDEFLKD KPEYKDVHEE FVDFIKGAEL VAHNAPFDVG FMDYEFAKLG
GAIGKTSDFC KVTDTLAMAK RIFPGKRNNL DILCERYGID NSHRTLHGAL LDAEILADVY
LLMTGGQTSL QFSSVTQNSG ELSAESLKRA RSERKALKVL AASADELQAH QDRLDIVAKS
GTCLWRS
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