Gene VC0395_A1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1808 
Symbol 
ID5136768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1924239 
End bp1924691 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content47% 
IMG OID640533265 
Producthypothetical protein 
Protein accessionYP_001217733 
Protein GI147673957 
COG category[R] General function prediction only 
COG ID[COG3019] Predicted metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTACA CCATGAAACG CACAATGATG ACACTCGCCC TATTGGCCAC ATTTTCAGGA 
CAAGCGCTTG CTACTCAGGT AGTGAATCAC AAATCTCCTT ATTGTGGTTG TTGCACCGAA
TGGACCAAAC ACATGGAAGA GAATGGTTTT ACGGTAAAAG AAGTGCTGCA TGACAACATG
GACAGCATTA AGCAACAACT GGGCGTAAAA CCTAAGCTAG CTTCTTGCCA TACCGCAGAG
ATCGGCGGTT ATGTCTTTGA AGGTCACATT CCAGCGCAAG ACATCAAAGA CTTTCTGGCT
AACCCACCGA AAAATGCCAA AGGGCTCGCG GTTCCCGGAA TGCCTATGGG TTCACCGGGT
ATGGAATATG GCGATAAGAA AGACAGTTAT GCGGTGTATG CCTTTAATGA GCACGGCCAA
GTCTTTGAAT ACCGCTCTTA TCAAGGGAAC TGA
 
Protein sequence
MRYTMKRTMM TLALLATFSG QALATQVVNH KSPYCGCCTE WTKHMEENGF TVKEVLHDNM 
DSIKQQLGVK PKLASCHTAE IGGYVFEGHI PAQDIKDFLA NPPKNAKGLA VPGMPMGSPG
MEYGDKKDSY AVYAFNEHGQ VFEYRSYQGN