| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1806 |
|---|
| Symbol | gltX |
|---|
| ID | 5136540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 1919897 |
|---|
| End bp | 1921426 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640533263 |
|---|
| Product | glutamyl-tRNA synthetase |
|---|
| Protein accession | YP_001217731 |
|---|
| Protein GI | 147675108 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00464] glutamyl-tRNA synthetase, bacterial family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCGAAAA TCGTGCGTAG CATCGCGTTA ACTCGGGTGT TAGAATACCG CCCAAAATTT
CGCATGCTGA GCTCTCAGCA AAAGAATCTC ACAAAGGTAA TTCAAATGAC GGTTAAAACT
CGTTTTGCGC CTAGTCCAAC TGGGTATCTG CACGTTGGTG GTGCGCGTAC AGCACTCTAT
TCTTGGTTAT ATGCTAAAAG CCAAGGTGGT GAATTTGTTC TGCGTATTGA AGACACCGAC
CTAGAACGCT CTACTCAGGC GGCGGTGGAT GCCATTATTG AAGGCATGAC GTGGTTAGGT
TTGGAATGGG ATGAAGGCCC ATACTACCAA ACCAAACGTT TTGATCGTTA CAACCAAGTG
ATTGATCAGC TATTGGCAGA AGGCAAAGCC TACAAGTGCT ATGCGCCGAA AGAGCTGCTG
GATGAAATCC GTGCTGAGCA AGAAGCCAAC AAAGAGATGC CTCGCTACGA TGCGAATCAT
CCAAAAATCA AAGCGGTCAA TGATGCGGCA AAAGAAGGTG AGCCTTGCTG TATCCGTTTC
CGTAACCCGA AAGAGGGGAG CGTCGTTTTT GATGACCAAA TCCGTGGCCG CATCGAAATC
CGTAACGACC AACTGGATGA TCTGATCATC CGTCGTACTG ATGGCACTCC AACCTATAAC
TTCTGTGTAG TCGTGGATGA TGTCGATATG GGTATCAGCC ATGTGATTCG TGGTGAAGAC
CACATCAACA ACACGCCACG CCAGATCAAC ATTTACAAAG CCATGGGCGC GACCATCCCA
ACCTTTGCGC ACTGTGCAAT GATCTTGGGT GATGATGGTG CCAAGCTATC TAAGCGCCAT
GGCGCGGTTT CTGTAATGCA ATACCGTGAT GATGGTTACC TCCCAGAAGC GCTGCTGAAC
TACTTAGTGC GTTTAGGTTG GGGACATGGC GACCAAGAGA TCTTCTCACG CGATGAAATG
ATCAACTTAT TCAGCCTTAA CGCAATTTCA AAATCAGCGT CAGCGTTTAA CACTGACAAA
CTGCTGTGGT TGAACAACCA CTACATCAAG ACTTCAGAGC CTGAGTATGT GGCGAAACAC
CTTGAGTGGC ATTTCGAGAA CCAAGGCATT AACAAAGCGA CCGGCCCTGC TTTAGCGGAA
GTGGTGAAGT TGGTGGGTGA GCGTTGCAAT ACCTTGGTTG AGCTTGCGCA GCAATCACGT
TACTTCTACG AAGATTTTGC TGAGTTTGAT GCTGATGCCG CGAAGAAACA CCTGCGTGGT
GTGGCAAAAG AGCCACTGAT GCTAGCTCTG AGCAAGATTG AAGCGCTGAC AGAATGGAAT
ACCGAAGCAC TGCATCACGT GATCGCACAA GTGTGTGAAG AGCTTGAGAT TGGCATGGGT
AAAATCGGTA TGCCACTGCG TGTTGCTGTG ACTGGCGGTG GCCAATCGCC TTCTGTGGAT
GCGGTGATGA ACTTGATTGG TCAAGAACGT GTAATTGCAC GTATCAAAAT GGCACTAGAG
TACATCGAAA CTCGCGAAGC GAATGCATAG
|
|---|
| Protein sequence | MPKIVRSIAL TRVLEYRPKF RMLSSQQKNL TKVIQMTVKT RFAPSPTGYL HVGGARTALY
SWLYAKSQGG EFVLRIEDTD LERSTQAAVD AIIEGMTWLG LEWDEGPYYQ TKRFDRYNQV
IDQLLAEGKA YKCYAPKELL DEIRAEQEAN KEMPRYDANH PKIKAVNDAA KEGEPCCIRF
RNPKEGSVVF DDQIRGRIEI RNDQLDDLII RRTDGTPTYN FCVVVDDVDM GISHVIRGED
HINNTPRQIN IYKAMGATIP TFAHCAMILG DDGAKLSKRH GAVSVMQYRD DGYLPEALLN
YLVRLGWGHG DQEIFSRDEM INLFSLNAIS KSASAFNTDK LLWLNNHYIK TSEPEYVAKH
LEWHFENQGI NKATGPALAE VVKLVGERCN TLVELAQQSR YFYEDFAEFD ADAAKKHLRG
VAKEPLMLAL SKIEALTEWN TEALHHVIAQ VCEELEIGMG KIGMPLRVAV TGGGQSPSVD
AVMNLIGQER VIARIKMALE YIETREANA
|
|---|
| |