| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1796 |
|---|
| Symbol | flgM |
|---|
| ID | 5136077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 1903282 |
|---|
| End bp | 1903605 |
|---|
| Gene Length | 324 bp |
|---|
| Protein Length | 107 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640533253 |
|---|
| Product | negative regulator of flagellin synthesis FlgM |
|---|
| Protein accession | YP_001217721 |
|---|
| Protein GI | 147673622 |
|---|
| COG category | [K] Transcription
[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2747] Negative regulator of flagellin synthesis (anti-sigma28 factor) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 65 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGTA TTGATAACAT ACGCGCAGGA CAGTCGTTAA ACACGACCAG CCGCACCAAT
GTGCGTTCTT CTGATGCCAG CAACTCTTCC ACTCAATCCG GGGCGGTATC GCGCTCATCG
GCAAGTGGTC AAGATGCGGT ATCGCTGAGC TCACAAAGTA AAGCCATTGG CGAAATGCAT
AGTGAAATGG CTTCAAGACC CAGTTTTGAC AGCGCAAAAG TCGCCGCAAT CAAAGAAGCG
ATTGCTAACG GCTCTTACGT GGTTGACCCT GAAAAACTGG CCGATAATAT GATCAAATTC
GAAAAAGAAC TGGGCGGCTT CTAA
|
|---|
| Protein sequence | MAGIDNIRAG QSLNTTSRTN VRSSDASNSS TQSGAVSRSS ASGQDAVSLS SQSKAIGEMH
SEMASRPSFD SAKVAAIKEA IANGSYVVDP EKLADNMIKF EKELGGF
|
|---|
| |