Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1793 |
Symbol | cheR-2 |
ID | 5137404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1900563 |
End bp | 1901390 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640533250 |
Product | chemotaxis protein methyltransferase CheR |
Protein accession | YP_001217718 |
Protein GI | 147673113 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 64 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGCTA TAACGATTAG CGACCAAGAG TATCGCGACT TTTGCCGATT TCTGGAATCT CAGTGCGGAA TTGTACTGGG TGACAGCAAG CAGTATTTGG TGCGAAGTCG TCTAAGTCCA CTCGTCACCA AATTCAAGTT AAGTTCGTTG TCTGACTTGT TGCGGGATGT CGTGACAGGA CGAAATCGCG ATCTGCGCGT AGCAGCGGTT GACGCCATGA CAACCAACGA AACCTTATGG TTTCGAGATT CCTACCCATT TACGGTTTTA GCTGACAAAT TATTGCCAGA AATGGCGGCA CATAAACGGC CGATAAAAAT CTGGTCGGCG GCCAGTTCAT CAGGCCAAGA GCCGTACTCC ATGGCGATGA CGATTTTAGA AGTGCAGCAA AAACGTCCGG GATTGTTGCC AAGCGTGTCA ATTACTGCCA CGGATATTTC AGCCAGTATG TTAGATATGT GCCGAGCCGG GATTTATGAC AACTTAGCTT TAGGACGTGG TTTATCTCCT GAGCGTCGTC GAGTGTTTTT CGAAGATGCT GGGGATGGCC GGATGAAGGT GAAGGATAAC GTAAAACGTT TAGTGAACTT CCGCCCGCAA AACTTAATGG AAAGTTACTC CTTGCTGGGT AAGTTTGACA TCATTTTTTG CCGTAACGTG CTGATCTATT TCTCGCCAGA TATGAAATCT AAAGTGCTTA ATCAGATGGC GGCAAGTTTG AACCCCGGCG GCTATTTACT GTTAGGGGCA TCCGAATCCC TGACTGGGCT GACGGATAAG TTTGAAATGG TGCGTTGTAA CCCTGGTATC ATCTATAAAC TCAAATAA
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Protein sequence | MTAITISDQE YRDFCRFLES QCGIVLGDSK QYLVRSRLSP LVTKFKLSSL SDLLRDVVTG RNRDLRVAAV DAMTTNETLW FRDSYPFTVL ADKLLPEMAA HKRPIKIWSA ASSSGQEPYS MAMTILEVQQ KRPGLLPSVS ITATDISASM LDMCRAGIYD NLALGRGLSP ERRRVFFEDA GDGRMKVKDN VKRLVNFRPQ NLMESYSLLG KFDIIFCRNV LIYFSPDMKS KVLNQMAASL NPGGYLLLGA SESLTGLTDK FEMVRCNPGI IYKLK
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