Gene VC0395_A1783 details

Gene Information

• Locus tag: VC0395_A1783
• Symbol: flgK
• ID: 5137085
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: -
• Start bp: 1890750
• End bp: 1892624
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640533240
• Product: flagellar hook-associated protein FlgK
• Protein accession: YP_001217708
• Protein GI: 147675062
• COG category: [N] Cell motility
• COG ID: [COG1256] Flagellar hook-associated protein
• TIGRFAM ID: [TIGR02492] flagellar hook-associated protein FlgK

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGTCTG ATCTTCTGAA TGTGGGTACG CAAAGCGTAC TGACGGCTCA GAGACAACTC 
AATACCACAG GTCATAACAT TTCCAATGTT AATACAGAGG GTTACAGCCG TCAGTCTGTG 
ATCCAAGGGA CCAATGCGCC TCGCCAATAC GGCGGTGAAA CCTATGGTAT GGGTGTGCAT 
GTGGAAAATG TTCGCCGCTC GTGGGATCAA TTTGCCGTTA AAGAGCTGAA TATTGCCTCT 
ACCGATTACG CTTTTAAGCG AGATACCGAA GAAAATCTCG ATATGCTGTC TAAGCTGCTT 
TCCTCTGTGG CTTCGAAGAA AATTCCTGAA AACCTCAATG AGTGGTTTGA TTCAGTAAAA 
AGTTTGGCTG ATTCGCCCAA TGATCTGGGT GCCCGTAAAG TGGTGCTCGA AAAATCCAAG 
CTCATTTCAC AAAACCTGAA TGATTTCCAT GAGACGGTTC GTTTACAAAA AGACATTACC 
AACAAAGGGT TAGCTCTTGG CGTAGAACGC ATCAACCAAC TGGCGTTGGA AATTCGTGAT 
TTGCAGCGTT TGATGATGCG CGTACCAGGG CCACATAACG ATTTGATGGA TAAGCATGAA 
AAGCTGGTAT CCGAACTGTC GCAATACACC AAAGTCACGG TCACGCAAAG AAAACATGGT 
GAAGGCTTCA ACATTCATAT CGGCAACGGC CACACTTTGG TTTCCGGTAC TGAAGCCAGC 
CAACTGAGAG TGATTGACGG TTTCCCAGAT ACCCAGCAAC ACCGTTTAGC CATGGTGGAA 
GGCAAGGCGC TCAAAGCCAT CTCCGCGCGT GATATTGGCG GCAAGATGGA AGCCATTTTA 
GATATGCGTG ATGAACACAT TCCGTACTTG ATGGATGAAG TCGGTCGTCT CGCACTCTCC 
TTTTCTCATG AAGTGAATAC CTTACAGTCA CAAGGTTTAG ATCTACGTGG CAATGTGGGT 
AGCGCTCTGT TTACCGATGT CAATTTGGAC GTCATTGCTC GCTCTCGTGT GGTGACCAAC 
AGTAATTCTA AAGCCGATAT GGCGGTATTT ATTGAAGATG TTAGCCAGCT CAAAGGTGGC 
GAATACTCCA TGCAGTACAA CGGCAGTGAA TTTGTGGTGA CTTTGCCTTC AGGCCAACAA 
ACCGTGTTGC CCGTGGTAAA AGGCAATGTG TATGTCGATG GCTTACGCGT AGAAGTACGT 
AACCCGCCCC AAGTCGGGGA GCGAATTTTG GTGCGCCCAA CTCGTAACGG TGCCGCTGCC 
ATTCGTTTAG CAACTGAAGA TGCGACAAAA ATTGCCGCAC AGAGCTTTGA AGCATCGACC 
ACTTTTGCCC AAGGCAAAGC GAAATTTAAG ATTTTACAAG CGGGGGATGT TCGCGAATTT 
GAAGTGATTG TCTCGCCAAC CGGCGATCAA TTCGCGGTGA CCGACACCAA AGGCAATATT 
TTACTTCAGC CTCAGCCTTA TCCGCCGACT GGGCCTGTGA CCGTATTGGG CACTACCTTT 
GAGCTGACAG AAGGTGCGTT ACCTAATGAT AAGTTCACGG CAAACCTTGT CCCTTCAGAA 
GGGGATAACG GCAACTTGCG TAAAATGATC AACATTCAAA CCGCAAAACG GATGAATGAT 
AACGAGTCCA CCATCATCGA TCTTTACCAC AACCTCAACA CGGATGTGGG GCTAAAAATG 
GCCACCATGA CGCGTTTGAC CGATGTGGCA AGACTGGAGA AAGAGGCGGC GCAATCGCGC 
ATCGCTTCGA TTTCCGGTGT GAACCTTGAT GAAGAAGCCG CCAACATGAT GAAATTTCAG 
CAAGCTTATA TGGCTTCCTC ACGCATCATT CAGGCCTCGA ACGACACTTT CAACACCATT 
TTGGCGTTGC GATAG 

 

Protein sequence

MASDLLNVGT QSVLTAQRQL NTTGHNISNV NTEGYSRQSV IQGTNAPRQY GGETYGMGVH 
VENVRRSWDQ FAVKELNIAS TDYAFKRDTE ENLDMLSKLL SSVASKKIPE NLNEWFDSVK 
SLADSPNDLG ARKVVLEKSK LISQNLNDFH ETVRLQKDIT NKGLALGVER INQLALEIRD 
LQRLMMRVPG PHNDLMDKHE KLVSELSQYT KVTVTQRKHG EGFNIHIGNG HTLVSGTEAS 
QLRVIDGFPD TQQHRLAMVE GKALKAISAR DIGGKMEAIL DMRDEHIPYL MDEVGRLALS 
FSHEVNTLQS QGLDLRGNVG SALFTDVNLD VIARSRVVTN SNSKADMAVF IEDVSQLKGG 
EYSMQYNGSE FVVTLPSGQQ TVLPVVKGNV YVDGLRVEVR NPPQVGERIL VRPTRNGAAA 
IRLATEDATK IAAQSFEAST TFAQGKAKFK ILQAGDVREF EVIVSPTGDQ FAVTDTKGNI 
LLQPQPYPPT GPVTVLGTTF ELTEGALPND KFTANLVPSE GDNGNLRKMI NIQTAKRMND 
NESTIIDLYH NLNTDVGLKM ATMTRLTDVA RLEKEAAQSR IASISGVNLD EEAANMMKFQ 
QAYMASSRII QASNDTFNTI LALR