Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1779 |
Symbol | flaC |
ID | 5135095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1886309 |
End bp | 1887442 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640533236 |
Product | flagellin |
Protein accession | YP_001217704 |
Protein GI | 147675419 |
COG category | [N] Cell motility |
COG ID | [COG1344] Flagellin and related hook-associated proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000663504 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGGTGA ATGTAAACAC CAACGTGTCA GCAATGACAG CACAACGGTA CTTGACGAGT GCAACCAATG CACAACAATC GTCAATGGAA CGTCTATCTT CAGGATACAA AATTAACAGC GCAAAAGACG ATGCGGCCGG TCTGCAGATC TCTAACCGCT TGAACGTGCA AAGCCGAGGT TTAGGTGTCG CCGTTCGTAA CGCCAACGAT GGTATTTCGA TGGCGCAAAC CGCGGAAGGG GCAATGAAAG AGACCACCAA CATCTTACAA CGTATGCGTG ATCTCTCCTT GCAATCAGCA AACGGTTCGA ACTCAAAAGC TGACCGTGTT GCGATTCAAG AAGAAATTAC CGCGTTGAAT GATGAGCTTA ATCGTGTGGC CGAAACCACC TCTTTCGGAG GTAACAAGCT GCTCAACGGT ACATTCGCAA CCAAATCATT CCAGATTGGT GCGGATAACG GTGAAGCGGT AATGCTTAAC ATCAAAGATA TGCGCAGCGA TAACGCTTTG ATGGGAGGTA AAACCTATCA AGCGGCTAAC GGTAAAGACA AAAACTGGGG CGTGGAAGCG GGTAAAACCG ATCTGACCAT CACTCTGAAA GACAAACGCG AAGGCGATGT CACCATTTCG ATCAATGCGA AAGAAGGGGA TGATATCGAA GAGCTGGCCA CTTACATCAA CGGTCAAACC GACATGATCA AAGCATCGGT GGATGAAGAA GGTAAGTTAC AGCTATTCAC TGATAACAAC CGAATCGATG GTGCTGCGAC CTTTGGTGGC GCACTTGCCG GTGAGTTAGG TATCGGTGCT GCGCAAGACG TGACGGTTGA TACTCTGGAT GTCACTACGG TTGGTGGTGC ACAAGAGAGT GTGGCGATTG TCGATGCTGC CTTGAAATAT GTGGATAGCC ATCGTGCTGA ACTCGGTGCA TTCCAAAACC GATTCAACCA CGCTATCAAC AACTTAGATA ACATTAACGA AAACGTGAAT GCGTCTAAGA GCCGGATCAA AGATACAGAC TTTGCCAAAG AAACGACTGC ACTGACCAAG GCGCAGATCC TTTCTCAAGC ATCAAGTTCT GTTCTCGCAC AAGCCAAGCA GGCACCCAAC TCAGCACTGG CTCTTCTAGG CTAG
|
Protein sequence | MAVNVNTNVS AMTAQRYLTS ATNAQQSSME RLSSGYKINS AKDDAAGLQI SNRLNVQSRG LGVAVRNAND GISMAQTAEG AMKETTNILQ RMRDLSLQSA NGSNSKADRV AIQEEITALN DELNRVAETT SFGGNKLLNG TFATKSFQIG ADNGEAVMLN IKDMRSDNAL MGGKTYQAAN GKDKNWGVEA GKTDLTITLK DKREGDVTIS INAKEGDDIE ELATYINGQT DMIKASVDEE GKLQLFTDNN RIDGAATFGG ALAGELGIGA AQDVTVDTLD VTTVGGAQES VAIVDAALKY VDSHRAELGA FQNRFNHAIN NLDNINENVN ASKSRIKDTD FAKETTALTK AQILSQASSS VLAQAKQAPN SALALLG
|
| |