| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1758 |
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| Symbol | lolB |
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| ID | 5137497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1879248 |
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| End bp | 1879883 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640533215 |
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| Product | outer membrane lipoprotein LolB |
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| Protein accession | YP_001217697 |
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| Protein GI | 147675171 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
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| TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000000519306 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGATAAAA AACGCACTAT GAATGCTCTC GTACGTCGCC TACTGCCAGG ATTGGCGAGT
CTGTTGCTTT TGGCAGGTTG TGCCACCGCA CCGCTACAAC CCGTCAATGT TCAATGGCAA
TCACACCAAG TCACTCTAGA ACAAATTCAA CATTATCAAT TAACCGGAAA ACTCGGCTAT
ATCGCGCCCG ATCAGCGACA ATCGTTCAAC TTTCAATGGC AAAAAAGCCC ACAAAAACTC
TCACTGCGTT TAAGCAATTT TCTTGGTCAA ACCGTGCTGA ACTTACAGGT CGATGAACAA
GGTGCGCGGG TCGAAACTTA TGATGATCAA ATCTACCGCG ACCAAGATGC ACAAAGCCTG
ATCCGCAATT TAACAGGGTT AGATATTCCC GTTGAACAGC TTGAAGATTG GATTTTAGGC
TTGCCGACCC AAGCAACCCA TTACGAGTTG AATGAACAAA ACACTCTTGC CACTCTCACC
AAACTCGCCT CAACGGAGGA ATGGCACGTA GAATACCAAC GTTACCAAGC GATTGAGTGG
CAACATCAGC CCATTCCGCT GCCTGATAAA CTTAAACTCC AGCAAAATAA AACCTCGATT
CAACTGGTGA TCTCACAATG GACGCTGCTC CCATGA
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| Protein sequence | MDKKRTMNAL VRRLLPGLAS LLLLAGCATA PLQPVNVQWQ SHQVTLEQIQ HYQLTGKLGY
IAPDQRQSFN FQWQKSPQKL SLRLSNFLGQ TVLNLQVDEQ GARVETYDDQ IYRDQDAQSL
IRNLTGLDIP VEQLEDWILG LPTQATHYEL NEQNTLATLT KLASTEEWHV EYQRYQAIEW
QHQPIPLPDK LKLQQNKTSI QLVISQWTLL P
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