Gene VC0395_A1754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1754 
Symbol 
ID5135101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1875483 
End bp1875866 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content46% 
IMG OID640533211 
Producthypothetical protein 
Protein accessionYP_001217693 
Protein GI147675215 
COG category[S] Function unknown 
COG ID[COG3094] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00000212251 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGAAG GATTAAAACA TTTTCACCTG TTCACTATCG GCGTCAGTGT AGTCATGCTG 
TCGATTCGCT ATGTGCTCAT GATGATGAAT TCAGCACACC TAGAGCGTAA GTTTTTCAAA
ATTTTCCCGC ATGTGAATGA CACGTTATTG CTGCTTTCCG GTATCGGTTT GATATTCATC
ACTGGATTCA TTCCTTTTAC CGCTGCCGCG CCGTGGATGA CAGAAAAATT TACCTGCGTG
CTGGCGTACA TCGCGCTAGG CTTTTTTGCA CTGAAATTAG GTCGTAATAA ATTGCTGCGT
AGCTTTGCGT TTTTTGGCGC GTTGGGCTGG TTGGCGATGG CTGGAAAAAT CGCGGTCGCC
AAAGCGCCGA TTCTGTTTGG TTAA
 
Protein sequence
MYEGLKHFHL FTIGVSVVML SIRYVLMMMN SAHLERKFFK IFPHVNDTLL LLSGIGLIFI 
TGFIPFTAAA PWMTEKFTCV LAYIALGFFA LKLGRNKLLR SFAFFGALGW LAMAGKIAVA
KAPILFG