Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1753 |
Symbol | |
ID | 5135360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1874655 |
End bp | 1875467 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640533210 |
Product | hypothetical protein |
Protein accession | YP_001217692 |
Protein GI | 147674484 |
COG category | [S] Function unknown |
COG ID | [COG2912] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00000302338 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAATT TATGTGATGA AGATTTTGAT GCGATGGAGT TGGTGGAAGG GGCGCTTGCG CTCAACAAAG CCATTAATCC CGAAACGCAG CTAGAATGGG CTCACATCGA GTTAGCACGT CTGCTAAAAG AAGCCGAACT GGCACTGGTA CATGAGCGTG ATGAGAAAGC GCGTTTCGAG GCTTTTTTGC GCCTGTTTTA TCAAGAGTGG GGCTTTAGCG GCGATCGCGA AGCCTACTTT GATTCTCGCA ATGCCTTTAT TGATCAAGTA TTGCAGCGGC GCAAAGGCAT TCCCGTCAGT TTAGGCTCAT TACTGCTCTA CCTAGGACAC AAACTTGGCT TTCCACTCAA TGGGATAAGT TTCCCGACTC AGTTTCTGCT GTCGCTCAAT TGGCCGGGAG AGCGGCCGAT TTATCTCAAT CCATTTAATG GCGAGATAGT GTCACAACAT ACACTGCAAG CTTGGTTAGT TGGGCACAAA GGCCCACTGG CCAAGCTTAA GCCACAGCAT TTACAAAGTG TCGATAATCC GACCATTATT GGGCGTTGGT TGGCGCTACT CAAAAGTGCC TTACTGCGTG AAGAGCGCTA TACTCTGGCG CTAAGATGTA CCGATTTGGC ACTCACTTTT GTGCCCGATG ACCCATACGA AATCCGTGAT CGTGGCTTTA TTTACCAACA GCTACAGTGC CATCAAATTG CTATTTCGGA CTATCAATAT TTTATTGAGC ACTGTCCGAA CGATCCGGCG GCTGAATTGT TAAAAACGCA AGTCAATGCA CTCAGTCACG ACAGTCAAGT GACGCTGCAT TAA
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Protein sequence | MLNLCDEDFD AMELVEGALA LNKAINPETQ LEWAHIELAR LLKEAELALV HERDEKARFE AFLRLFYQEW GFSGDREAYF DSRNAFIDQV LQRRKGIPVS LGSLLLYLGH KLGFPLNGIS FPTQFLLSLN WPGERPIYLN PFNGEIVSQH TLQAWLVGHK GPLAKLKPQH LQSVDNPTII GRWLALLKSA LLREERYTLA LRCTDLALTF VPDDPYEIRD RGFIYQQLQC HQIAISDYQY FIEHCPNDPA AELLKTQVNA LSHDSQVTLH
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