| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1752 |
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| Symbol | kdsA |
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| ID | 5135502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1873784 |
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| End bp | 1874635 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533209 |
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| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
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| Protein accession | YP_001217691 |
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| Protein GI | 147674359 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
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| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000000431102 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACACA AAATTGTCCA TGTCGGTGAT ATTCCGGTTG CCAACGATAA GCCGTTTACC
CTATTTGCAG GGATGAACGT ACTGGAATCG CGTGATTTGG CGATGCAAAT TTGTGAGCAC
TACGTGAAAG TGACCGACAA GCTCGGCATC CCTTATGTGT TCAAAGCATC GTTTGATAAA
GCGAACCGCA GTTCAGTGCA CTCTTACCGT GGCCCAGGCT TGGAAGAAGG GATGAAAATT
TTCCAAGAGC TGAAAGAGAC CTTTGGCGTG AAGATCATCA CCGATGTCCA CACAGAAGCG
CAAGCGCAGC CTGTGGCGGA TGTGGTGGAT GTGATTCAGC TACCTGCCTT TTTGGCCCGT
CAAACCGACT TGGTTGAAGC GATGGCGAAA ACCGGCGCGG TCATTAACGT GAAAAAACCG
CAGTTCATGA GCCCGGGTCA AGTTGGCAAC ATCGTTGAGA AGTTTGCTGA GTGTGGCAAT
GACAAAGTGA TCTTATGTGA ACGTGGCTCT TGCCACGGCT ACGATAACCT CGTCGTCGAT
ATGCTCGGCT TTGGTGTGAT GAAGCAAGCT TCTAACGGCA GTCCAATCAT TTTTGATGTG
ACTCACTCAC TGCAAATGCG TGATCCATCA GGTGCGGCAT CGGGCGGTCG TCGTGAGCAG
ACCGTTGAAC TGGCGAAAGC CGGTTTGGCG ACGGGCATTG CAGGTCTGTT TATTGAGGCG
CACCCAAATC CAGATAAAGC GCGTTGCGAT GGCCCATCGG CATTACCTCT CGACAAATTA
GAGCCATTCC TTGCGCAAAT GAAAGCGCTG GATGATTTAA TCAAAAGCTT TGCGCACATC
GATATTCGAT AA
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| Protein sequence | MEHKIVHVGD IPVANDKPFT LFAGMNVLES RDLAMQICEH YVKVTDKLGI PYVFKASFDK
ANRSSVHSYR GPGLEEGMKI FQELKETFGV KIITDVHTEA QAQPVADVVD VIQLPAFLAR
QTDLVEAMAK TGAVINVKKP QFMSPGQVGN IVEKFAECGN DKVILCERGS CHGYDNLVVD
MLGFGVMKQA SNGSPIIFDV THSLQMRDPS GAASGGRREQ TVELAKAGLA TGIAGLFIEA
HPNPDKARCD GPSALPLDKL EPFLAQMKAL DDLIKSFAHI DIR
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